Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00180 ATGGAGAAAAAGGTCTGGGCTTCAGCTTTCCTCTGGTTGCTCTTGTTAATTCATCCATTATGGATGATTTCTGCTAATATGGAAGGTGATGCTTTACATAGCCTGAGGGCAAATTTACTGGACCCCAACAATGTTTTGCAAAGTTGGGATCCTACACTTGTCAATCCATGCACATGGTTTCACGTAACATGTAACAATGATAATAGTGTCATAAGAGTCGATCTAGGAAATGCTGCTTTGTCTGGTCAACTTGTTCCACAGCTTGGCCTGCTCAAGAATTTGCAATATTTGGAACTTTACAGCAATAATATTAGTGGCCCAATTCCAAGTGACCTTGGGAATCTTACTAGCTTGGTGAGCTTGGATCTTTACTTGAACAGTTTCACTGGTCCTATCCCAGATTCATTGGGCAAGTTGTCAAAATTGCGGTTCCTTCGGCTTAACAACAACAGCTTGACAGGACCTATTCCAATGTCATTGACTAATATATCATCTCTACAAGTGCTGGATTTATCTAATAATCATCTCTCCGGGGTGGTTCCTGATAATGGTTCCTTCTCCTTGTTCACTCCTATCAGTTTTGCCAACAACTTGGATTTATGTGGGCCTGTCACTGGGCACCCATGTCCAGGCTCTCCTCCATTTTCTCCTCCTCCTCCTTTTGTCCCACCACCTCCAATTTCTACCCCAGGAGGTAATAGTGCCACTGGGGCGATTGCTGGTGGAGTTGCTGCTGGTGCTGCTCTGTTATTTGCTGCTCCTGCAATTGCCTTTGCATGGTGGCGACGGAGGAAACCACAGGAATTTTTCTTTGATGTGCCTGCCGAAGAGGATCCTGAAGTCCATCTAGGGCAGCTTAAGAGGTTCTCACTACGAGAACTGCAAGTTGCAACAGATAGTTTCAGCAATAAGAACATTCTAGGAAGGGGTGGATTTGGTAAGGTATACAAAGGACGGCTAGCGGATGGTTCATTGGTTGCTGTGAAAAGACTGAAGGAGGAGCGCACACCTGGTGGGGAACTTCAGTTTCAAACTGAAGTCGAGATGATCAGTATGGCTGTGCATCGTAATCTTCTCCGGTTACGTGGGTTCTGTATGACACCAACAGAAAGGCTACTCGTTTACCCCTACATGGCTAATGGAAGTGTTGCATCATGTTTAAGAGGACTCCTGAAAGAGAAAAAGCTAGAAATGCTGGTTGATCCTGATCTCCAGAACAATTATGTAGAAGCTGAGGTAGAACAGCTAATCCAGGTTGCTCTATTGTGCACACAAGGTTCTCCTATGGAGCGACCTAAGATGTCAGAAGTGGTGAGAATGCTTGAAGGTGATGGCTTGGCAGAGAGATGGGATGAGTGGCAGAAGGTGGAAGTTCTCCGACAAGAAGTGGAGCTTGCCCCGCATCTGAACTCCGATTGGATCGTGGACTCGACTGAGAATCTACATGCAGTTGAGTTATCTGGTCCAAGGTAG 1473 0.4562 MEKKVWASAFLWLLLLIHPLWMISANMEGDALHSLRANLLDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGLLKNLQYLELYSNNISGPIPSDLGNLTSLVSLDLYLNSFTGPIPDSLGKLSKLRFLRLNNNSLTGPIPMSLTNISSLQVLDLSNNHLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISTPGGNSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRGLLKEKKLEMLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHLNSDWIVDSTENLHAVELSGPR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00180 490 Gene3D Transferase(Phosphotransferase) domain 1 374 461 - -
Bach1g00180 490 SUPERFAMILY Protein kinase-like (PK-like) 279 391 IPR011009 -
Bach1g00180 490 ProSiteProfiles Protein kinase domain profile. 301 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00180 490 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Bach1g00180 490 FunFam Somatic embryogenesis receptor kinase 1 270 377 - -
Bach1g00180 490 Pfam Protein kinase domain 302 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00180 490 Gene3D Phosphorylase Kinase; domain 1 270 373 - -
Bach1g00180 490 FunFam Somatic embryogenesis receptor kinase 1 24 211 - -
Bach1g00180 490 Pfam Leucine Rich Repeat 165 182 IPR001611 GO:0005515
Bach1g00180 490 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 395 452 - -
Bach1g00180 490 SUPERFAMILY L domain-like 29 190 - -
Bach1g00180 490 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Bach1g00180 490 Gene3D Ribonuclease Inhibitor 24 211 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00180 Bach-Chr1 2199163 2204626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00180 387 490 Receptor kinase-like Gene Family AT1G71830 83.654 9.67e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bach1g00180 Pkinase 7.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00180 K13418 - qsa:O6P43_004118 665.611