Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00179 ATGCCTTTTCTAACATTCCATTTTGTTTTCTCTTGTTCTCTGTCTGGTATCAGCGATATAGGAAATGCTGCTTTGTCTGGTCAACTTGTTCCACAGCTTGGCCTGCTCAAGAATTTGCAATATTTGGAACTTTACAGCAATAACATTAGTGGCCCAATTCCAAGTGACCTTGGGAATCTTACTAGCTTGGTGAGCTTGGATCTTTACTTGAACAGTTTCACTGGTCCTATCCCAGATTCATTGGGCAAGTTGTCAAAATTGCGGTTCCTTCGGCTTAACAACAACAGCTTGAGAGGACCTATTCCAATGTCATTGACTAATATATCATCTCTACAAATGCTGGATTTATCTAATAATCGTCTCTCCGGGGTGGTTCCTGATAATGGTTCCTTCTCCATGTTCACTCCTATCAGTTTTGCCAACAACTTGGATTTATGTGGGCCTGTCCCTGGGCACCCATGTCCAGGCTCTCCTCCATTTTCTCCTCCTCCTCCTTTTGTCCCACCACCTCCAATTTCTACCCCAGGAGGTAATAGTATCACTGTGACGATTGCTGGTGGAGTTGTTGCTGGTGCTGTTCTGTTATTTGGTGCTCCTGCAATTGCCTTTGCATGGTGGCGACGGAGGAAACCACAGGAATTTTTCTTTGATGTGCCTGCCGAAGAGGATCCTGAAGTCCATCTAGGGCAGCTTAAGAGGTTCTCACTACGAGAAGTGCAAGTTGCAACAGATAGTTTCAGCAATAAGAACATTCTGGGAAGGGGTGGATTTGGTAAGGTATACAAAGGACGGCTAGCAGATGGTTCATTGGTTGCTGTGAAAAGACTGAAGGAGGAGCGCACACATGGTGGGGAACTTCAGTTTCAAACTGAAGTCGAGATGATCAGTATGGCTGTGCATCCTAATCTCCTCCGGTTACGTGGGTTCTGTATGACACCGACAGAAAGGCTACTTGTTTACCCCTACATGGCTAATGGAAGTGTAAAAGGACTCCTGAAAGAGAAAAAGTCAGAAATGCTGGTTGATCCTGATCTCCAGTACAATTATGTAGAAGCTGAGGTAGAACAGCTAATCCAGGTTGCTCTACTGTGCACACAAGGTTCTCGTATGGACCGACCTAAGATGTCAGAAGTGGTGAGAATGCTTGAAGGTGATGGCGCGGCAGAGAGATGGGAAGAGTGGCAGAATGTGGAAGTTTTCCAACAAGAAGTGGATCTTGCCCCGCATCTGAACTCCGATTGGATCGTGGACTCGACTGAGAATCTACATGCATTTTGA 1278 0.4562 MPFLTFHFVFSCSLSGISDIGNAALSGQLVPQLGLLKNLQYLELYSNNISGPIPSDLGNLTSLVSLDLYLNSFTGPIPDSLGKLSKLRFLRLNNNSLRGPIPMSLTNISSLQMLDLSNNRLSGVVPDNGSFSMFTPISFANNLDLCGPVPGHPCPGSPPFSPPPPFVPPPPISTPGGNSITVTIAGGVVAGAVLLFGAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLREVQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTHGGELQFQTEVEMISMAVHPNLLRLRGFCMTPTERLLVYPYMANGSVKGLLKEKKSEMLVDPDLQYNYVEAEVEQLIQVALLCTQGSRMDRPKMSEVVRMLEGDGAAERWEEWQNVEVFQQEVDLAPHLNSDWIVDSTENLHAF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00179 425 Gene3D Ribonuclease Inhibitor 9 156 IPR032675 -
Bach1g00179 425 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 336 393 - -
Bach1g00179 425 Pfam Protein tyrosine and serine/threonine kinase 249 342 IPR001245 GO:0004672|GO:0006468
Bach1g00179 425 SUPERFAMILY Protein kinase-like (PK-like) 224 337 IPR011009 -
Bach1g00179 425 ProSiteProfiles Protein kinase domain profile. 246 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00179 425 FunFam Somatic embryogenesis receptor kinase 1 215 322 - -
Bach1g00179 425 SUPERFAMILY L domain-like 19 140 - -
Bach1g00179 425 Gene3D Phosphorylase Kinase; domain 1 215 322 - -
Bach1g00179 425 ProSitePatterns Protein kinases ATP-binding region signature. 252 274 IPR017441 GO:0005524
Bach1g00179 425 FunFam Somatic embryogenesis receptor kinase 1 12 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00179 Bach-Chr1 2188322 2192321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00179 328 424 Receptor kinase-like Gene Family AT1G71830 77.320 2.97e-44 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bach1g00179 PK_Tyr_Ser-Thr 4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00179 K13418 - pop:7475818 506.523