Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00178 ATGCATCAACATCATTCTCATCTAATTGGGCTGGCAACTTGTGATGCTTTACATAGCCTGAGGGCAAATTTAGAGGACCCCAACAATGTTTTGCAAAGTTGGGATCCAACACTTGTCAATCCATGCACATGGTTTCACGTAACATGTAACAATGATAATAGTGTCATAAGAGTCGATATAGGAAATGCTGCTTTGTCTGGTCAACTTGTTCCACAGCTTGGCCTGCTCAAGAATTTGCAATATTTGGAACTTTACGGCAATAACATTAGTGGCCCAATTCCAAGTGACCTTGGAAATCTTACTAGCTTGGTGAGCTTGGATCTTTACTTGAACAGTTTCACTGGTCCTATCCCAGATTCATTGGGCAAGTTGTCAAAATTGCGGTTCCTGGATTTATCTAATAATCGTCTCTCCGGGGTGGTTCCTGATAATGGTTCCTTCTCCTTGTTCACTCCTATCAGTTTTGCCAACAACTTGGATTTATGTGGGCCTGTCACTGGGCACCCATGTCCAGGCTCTCCTCCATTTTCTCCTCATCCTCCTCCTTTTGTCCCACCACCTCCAATTTCTACCCCAGGAGGTAATAGTGCCTCTGGGGCGATTGCTGGTGGAGTTGCTGCTGGTGCTGCTCTGTTATTTGCTGCTCCTGCAATTGCCTTTGCATGGTGGCGACGGAGGAAACCACAGGAATTTTTCTTTGATGTGCTTGTCGAAGAGGATCCTGAAGTCCATCTAGGGCAGCTTAAGAGGTTCTCACTACGAGAACTGCAAGTTGCAACAGATCGTTTCAGCAATAAGAACATTCTGGGAAGGGGTTTATTTGGTAAGGTATACAAAGGACGGCTAGCAGATGGTTCATTGGTTGCTGTGAAAAGACTGAAGGAGGAGCGCACACCTGGTGGGGAACTTCAGTTTCAAACTGAAGTCGAGATGATCAGTATGACTGTGCATCGTAATCTTCTCCGGTTACGTGGGTTCTGTATGACACCAACAGAAAGGCTACTCGTTTACCCCTACATGGCTAATGGAAGTGTTGCATCACGTTTAAGAGGTTGA 1056 0.4545 MHQHHSHLIGLATCDALHSLRANLEDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDIGNAALSGQLVPQLGLLKNLQYLELYGNNISGPIPSDLGNLTSLVSLDLYLNSFTGPIPDSLGKLSKLRFLDLSNNRLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPHPPPFVPPPPISTPGGNSASGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVLVEEDPEVHLGQLKRFSLRELQVATDRFSNKNILGRGLFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMTVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRG 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00178 351 Gene3D Phosphorylase Kinase; domain 1 232 339 - -
Bach1g00178 351 Pfam Protein tyrosine and serine/threonine kinase 266 350 IPR001245 GO:0004672|GO:0006468
Bach1g00178 351 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 349 - -
Bach1g00178 351 Gene3D Ribonuclease Inhibitor 13 172 IPR032675 -
Bach1g00178 351 ProSiteProfiles Protein kinase domain profile. 263 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00178 351 ProSitePatterns Protein kinases ATP-binding region signature. 269 291 IPR017441 GO:0005524
Bach1g00178 351 Pfam Leucine rich repeat 78 137 IPR001611 GO:0005515
Bach1g00178 351 SUPERFAMILY L domain-like 15 147 - -
Bach1g00178 351 SUPERFAMILY Protein kinase-like (PK-like) 241 350 IPR011009 -
Bach1g00178 351 FunFam Somatic embryogenesis receptor kinase 1 232 339 - -
Bach1g00178 351 FunFam Somatic embryogenesis receptor kinase 1 10 143 - -
Bach1g00178 351 Pfam Leucine rich repeat N-terminal domain 15 50 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00178 Bach-Chr1 2182098 2184436 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00178 15 350 Receptor kinase-like Gene Family AT1G34210 85.000 4.09e-178 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bach1g00178 PK_Tyr_Ser-Thr 4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00178 K13418 - pop:7475818 535.798