Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00177 ATGGTTCCTTCTCCTTGTTCACTCCTATCAGTTTTGCCAACAACTTGGATTTATGTGGGCCTGTCACTTGGCACCCATGTCCAGGCTCTCCTCCATTTTGTCCCACCACCTCCAATTTCTACCCCAGGAGGTAAGAATGCCATTGGGGCAATTGCTCGTGGAGTTGCTGCTGGTGCTGCTGTGTTATTTGCTGCTCCTGCAATTGCCTTTGCGTGGTGGCGACGGAGGAAACCACAAAAAATTTTCTTTGATGTGCCTGCCGAAGAGGATCCGGAAGGCCATCTAGGGCAGCTTAAGAGGTTCTCACTACGAGAACTGCAAGTTGCAACAGATAATTTCAGCAGTAAGAACGTTCTGGGAGGGAGTGGATTTGGTAAGGTATACAAAGGACGACTAGCAGATGGTTCATTGGTTGCTGTGAAAAGACTGAAGGGGGCGGGCACATGTCCTGTGGAACGTCAGTTTCAAACTGAAGTCGATATGATCAATATGGCTGTGCATCGTAATCTTCTCCTGTTAAGTGGGTTCTGTTTGACACCAACAGAAAGGCTACTCGTTTACCCCTACATGGCTAATGGAAGTGTTGCATCATGTTTAAGAGAAGTTGAGGTAGAACAGCTAATCCAGGTTGCTCTACTGTGCACACAAAGTTCTCCTATGGAGCGACCTAAGATGTCAGAAGTGGTGAGAATGCTTGAAGGTGATGGCTTGGCAGAGAGATGGGAAGAGTGGCAGAATGTTGAAGTTCTCCAACAAGAAGTGGATCTTGCCCAGCATCTGAACTCCCATTGGATCGTGGACTCGACTGAGAATCTACATGCAGTTGAGTTATCTGGTCCAAGGGATTTATCTAATAATCGTCTCTCCGGGGTGATTCCTGATAATGGTTCCTTCTCCTTGTTCACTCCTGTCAGTTTTGCCAACAACTTGGATTTATGTGGGCCTGTCACTGGGCAGCCATGTCCAGGCTCTCCATTTTTTCCTCATCCTCCTCCTTTTGTCCCACCACCTCCAATTTCTACCCCAGGAGGTAAGAGTGCCATTGGGGCAATTGCTCGTGGAGTTGCTGCTGGTGCTGCTCTGTTATTTGCTGCTCCTGCAATTGCCTTTGCGTGGTGGCGACGGAGGAAACCACAAAAAATTTTCTTTGATGTGCCTGCCGAAGAGGATCCTGAAGGCCATCTAGGGCAGCTTAAGAGGTTCTCACTACGAGAACTGCAAGTTGCAACAGATAATTTCAGCAATAAGAACGTTCTGGGAGGGAGTGGATATGGTAAGGTATACAAAGGACGACTAGCAGATGGTTCATTGGTTGCTGTGAAAAGACTGAAGGGAGCGGGCACACCTCCTGTGGAACTTCAGTTTCAAACTGAAGTCGAGATGATCAGTATGACTGTGCATCGTAATCTTCTCCGGTTACGTGGGTTCTGTATGACACCAACAGAAAGGCTACTCGTTTACCCCTACATGGCTAATGGAAGTGTTGCATCACGTTTAAGAGGTTGA 1506 0.4768 MVPSPCSLLSVLPTTWIYVGLSLGTHVQALLHFVPPPPISTPGGKNAIGAIARGVAAGAAVLFAAPAIAFAWWRRRKPQKIFFDVPAEEDPEGHLGQLKRFSLRELQVATDNFSSKNVLGGSGFGKVYKGRLADGSLVAVKRLKGAGTCPVERQFQTEVDMINMAVHRNLLLLSGFCLTPTERLLVYPYMANGSVASCLREVEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQNVEVLQQEVDLAQHLNSHWIVDSTENLHAVELSGPRDLSNNRLSGVIPDNGSFSLFTPVSFANNLDLCGPVTGQPCPGSPFFPHPPPFVPPPPISTPGGKSAIGAIARGVAAGAALLFAAPAIAFAWWRRRKPQKIFFDVPAEEDPEGHLGQLKRFSLRELQVATDNFSNKNVLGGSGYGKVYKGRLADGSLVAVKRLKGAGTPPVELQFQTEVEMISMTVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRG 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00177 501 FunFam Somatic embryogenesis receptor kinase 1 382 489 - -
Bach1g00177 501 ProSiteProfiles Protein kinase domain profile. 413 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00177 501 Pfam Protein tyrosine and serine/threonine kinase 416 500 IPR001245 GO:0004672|GO:0006468
Bach1g00177 501 Pfam Protein tyrosine and serine/threonine kinase 116 203 IPR001245 GO:0004672|GO:0006468
Bach1g00177 501 Gene3D Ribonuclease Inhibitor 239 325 IPR032675 -
Bach1g00177 501 SUPERFAMILY Protein kinase-like (PK-like) 395 500 IPR011009 -
Bach1g00177 501 SMART tyrkin_6 113 283 IPR020635 GO:0004713|GO:0006468
Bach1g00177 501 SUPERFAMILY Protein kinase-like (PK-like) 93 203 IPR011009 -
Bach1g00177 501 Gene3D Phosphorylase Kinase; domain 1 382 489 - -
Bach1g00177 501 Gene3D Phosphorylase Kinase; domain 1 82 189 - -
Bach1g00177 501 FunFam Somatic embryogenesis receptor kinase 1 82 189 - -
Bach1g00177 501 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 203 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00177 Bach-Chr1 2172221 2178579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00177 282 500 Receptor kinase-like Gene Family AT1G71830 84.475 1.58e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bach1g00177 PK_Tyr_Ser-Thr 2.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00177 K13418 - pop:7475818 323.939