Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00141 ATGGATCATAAAGAGAACTTATGTGGTAACACCTGGGCAAGGTCTTTGTCAACTTGTGCTGGGAATAGATTACAGACAAATTTATCCTCGGACCCTGTGGCTTTTCCAGATTTCAGTTTGCAGCATAATCAACAGAAATGGGAAGATGCCTCTATTTCAGATTATGGTATGGGGATTGAAGCACCATTCAAAGAATTCAACCAACTACCGAGTAATTCCAATGAGATGAAGATGTCCGATCAAGAAAATTGTCAGATGAGTGATGCATCACAAGCCAGCAAACTCCAAGATTGGGATCCCAGAATGATGTTGAATAATCTTTCTTTCCTGGAAGAAAAGATTCATCAGCTCCAGGATTTTGTCCATTTGATTGTTGGTCGAAAAGGCCAACAATTTGGACAACCTGATGAACTTGCTATTCAGGAACAGCAGCTCGTCACGGCTGATCTTACATCAATTATTGTTCAATTGATCTCTACCGCCGGTAGTCTTCTCCCGTCTGTGAGGCATTCACTTACAACCAGTAGTCCATCTATTGCACAGCTTAGTCAGCTTCATGGAGTTTCCTTTCCTTCCGGATCAGGGCCGAGTAATAGTATTCAGCCACAATCTGATAATGGAAATCAGATGTCTGATCAATCTACCAAGATTGATAGAACTAATAATGGTGAAATGGAGCAAAATTACAATATGGAAGAACATGAACACAAAGATGAGGAGGATGTGGAGGAAGGAGAGAACCTTCCACCTGGTTCCTATGAGATTTTACAGTTAGAAAAAGAAGAAATTCTCGCACCTCATACGCATTTCTGTACAATTTGTGGGAAGGGATTCAAGAGAGATGCAAATCTTCGGATGCACATGCGAGGACATGGTGATGAATACAAAACCCCAGAAGCACTTGCTAGACCTCAAAAAGAATCTGGGTCTGAACCAAAGCTTATCAAGAGGTATTCCTGCCCCTATGCTGGCTGCAAGCGTAACAAAGATCACAAGAAGTTTCTACCTCTGAAGACTATCTTGTGTGTCAAAAACCATTACAAAAGAACACACTGTGACAAGAGTTACACTTGCAGCAGATGTCACACAAAGAAATTCTCGGTCATGGCAGACCTTAAAACTCACGAAAAGCATTGTGGAAAAGACAAATGGCTTTGTTCATGTGGCACGACATTTTCAAGGAAAGACAAGCTTTTTGGACACATTGCTCTGTTCCAAGGCCATACTCCAGCCATTCCCTTGGATGATGCTAAAGGGTCAGCTGTCCCACCTGATTCAGAAAGCAAAGAAAATAGTTGTAAGGTAGCAAATTTTGGATCAAATCCCTCTATTGGAGATGGAGTTCAGTGCATCATGGATATGAAAGGTAACGTTGATGATCCTATAAGTTATTTTTCCTCATTGAACTTTGATACCTGTAACTTCAATGGGTTTAATGAATTCCTTCGACCCACATTTGAGGACTCAGAGGCTTCATTCTCTTTTCTTCTGCCTGGATCTTTTAACTACAATCCCAAAGCTGGAGCAGAAGCAAGTTCTGATAATTTATAG 1551 0.4107 MDHKENLCGNTWARSLSTCAGNRLQTNLSSDPVAFPDFSLQHNQQKWEDASISDYGMGIEAPFKEFNQLPSNSNEMKMSDQENCQMSDASQASKLQDWDPRMMLNNLSFLEEKIHQLQDFVHLIVGRKGQQFGQPDELAIQEQQLVTADLTSIIVQLISTAGSLLPSVRHSLTTSSPSIAQLSQLHGVSFPSGSGPSNSIQPQSDNGNQMSDQSTKIDRTNNGEMEQNYNMEEHEHKDEEDVEEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPEALARPQKESGSEPKLIKRYSCPYAGCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCHTKKFSVMADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLDDAKGSAVPPDSESKENSCKVANFGSNPSIGDGVQCIMDMKGNVDDPISYFSSLNFDTCNFNGFNEFLRPTFEDSEASFSFLLPGSFNYNPKAGAEASSDNL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00141 516 MobiDBLite consensus disorder prediction 186 221 - -
Bach1g00141 516 ProSitePatterns Zinc finger C2H2 type domain signature. 271 291 IPR013087 -
Bach1g00141 516 ProSiteProfiles Zinc finger C2H2 type domain profile. 269 296 IPR013087 -
Bach1g00141 516 Gene3D Classic Zinc Finger 253 323 - -
Bach1g00141 516 SMART c2h2final6 356 378 IPR013087 -
Bach1g00141 516 SMART c2h2final6 269 291 IPR013087 -
Bach1g00141 516 SMART c2h2final6 318 351 IPR013087 -
Bach1g00141 516 SUPERFAMILY beta-beta-alpha zinc fingers 268 293 IPR036236 -
Bach1g00141 516 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 76 489 IPR044300 GO:0010044|GO:0010447
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00141 Bach-Chr1 1738825 1740375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00141 237 514 C2H2 Transcription Factor Family AT1G34370 68.136 2.07e-139 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach1g00141 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00141 - - qsa:O6P43_004100 753.436