Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00130 ATGGGTTTCATTGTAAATGATTATGATGCATGCCTTGATGCCATGCTGCTATCCAGTGGTCAAGTTTATCCTGCTGTGTTGAATGCTGCCATTGAGCTCAATCTGTTTCAGATCATTAACCAGGCAGGCCCCGTGGGCATATCTCCCTCTGAGATTGCTTCTAAACTTGTCGCTCAACACGCAGACACAGCTAATAGGCTTGACCGCATGCTGTTTCTGCTGGCTAGTTACTCTCTTCTGACTTGCTCAAAGCGAGTCAATGAAGATGGCAGGCAAAATTTTAAGGAGGTTATTCTTGATGGTGAAGAGGGTTTATTCAAGAAAGTACATGGATTACCTCTCTTTGAATATATGGAAACGGATCCAACTCTAAAACCTTTGTTCCACAAGACAATGGCAGATCTCTCTACTATGCATATGAGGCAGATTCTTGAAAAGTATGAAGGATTTGATGGAATATCAACACTTGTTGATGTGGCTGGTGGTATTGGGCAAAGCCTCAAGATGATCACTTCTAAGTACCCTCTCATAAAGGGTATTAACTTTGACCTGCCCCATGTGGTAGAGCATGCTCCACCTTACCCAGGAATTGAGCATGTTGGTGGGAATATGTTCAAAAGTGTACCAGAAGGAGATGCAATAATGATTAAGGCTACAACTCATAATTGGTCTGATGAAGACTGCGTACAGATTTTGAAAAACTGCTATAAATCCCTAAAAGATGGAGGCAAGGTGATCATCATGGATTTAATAATGCCAGAATTGCCAAAGGCAACTGATGGTGATAAGTATGCTGCTATTCTTGACAACGTCATGTTTCTGCAACCTGGAGGCAAGGAAAGAACTCTGCAAGAGTTTGAATGTTTATGCAAAGGTGCTGGGTTTTCAAGATATGAAGTTGTTTGTCGTGTGTTCTCTGGAGCCTTGGGAGTTATTGAATTCTATAAATAA 951 0.4154 MGFIVNDYDACLDAMLLSSGQVYPAVLNAAIELNLFQIINQAGPVGISPSEIASKLVAQHADTANRLDRMLFLLASYSLLTCSKRVNEDGRQNFKEVILDGEEGLFKKVHGLPLFEYMETDPTLKPLFHKTMADLSTMHMRQILEKYEGFDGISTLVDVAGGIGQSLKMITSKYPLIKGINFDLPHVVEHAPPYPGIEHVGGNMFKSVPEGDAIMIKATTHNWSDEDCVQILKNCYKSLKDGGKVIIMDLIMPELPKATDGDKYAAILDNVMFLQPGGKERTLQEFECLCKGAGFSRYEVVCRVFSGALGVIEFYK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00130 316 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 316 IPR016461 GO:0008168
Bach1g00130 316 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 303 IPR029063 -
Bach1g00130 316 Gene3D Vaccinia Virus protein VP39 125 304 IPR029063 -
Bach1g00130 316 PIRSF O-mtase 89 316 IPR016461 GO:0008168
Bach1g00130 316 PIRSF O-mtase 5 93 IPR016461 GO:0008168
Bach1g00130 316 Pfam O-methyltransferase domain 94 296 IPR001077 GO:0008171
Bach1g00130 316 FunFam Caffeic acid 3-O-methyltransferase 3 95 - -
Bach1g00130 316 Pfam Dimerisation domain 26 75 IPR012967 GO:0046983
Bach1g00130 316 SUPERFAMILY "Winged helix" DNA-binding domain 7 91 IPR036390 -
Bach1g00130 316 PANTHER O-METHYLTRANSFERASE 14 303 IPR016461 GO:0008168
Bach1g00130 316 CDD AdoMet_MTases 155 252 - -
Bach1g00130 316 Gene3D - 22 143 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00130 Bach-Chr1 1655447 1657162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00130 5 316 Monolignol Biosynthesis Gene Families AT5G54160 46.176 1.66e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00130 - - qsu:112031144 382.874