Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00125 ATGGGTTCCATTGAAAATGATTATGATGCATGTCTTCATGCCATGTTGCAATCCAGTGGTCAAGTCTATCCTGCTGTGTTGAATGCTGCCATTGAGCTAAACCTGTTTGAGATCATTGACCAGGCAGGCTCTAATAGCATATCACCCTCTCAGATTGCTTCTAAACTTGCCATTCAACATGCAGACACAGCTAATAGGCTTGACCGCATGCTGTTTTTGCTTGCTAGTTACTCTCTTCTTACTTGCTCAAAGAGTGTTAATGGAGATGGTAGGGTTGAGAGAATTTATCAACTCTCTTCCACTGGTAAATATATACTCAACGACAAGGAGGGATCCTCATATGCTACGCTTGCAAGGTCATGTTTCCACCCAGCCTATATATCACTTTGGCAAAACTTTAAGGAGGTTATTCTTGATGGTGAGGAGGATTTATTCAAGAAAGTACATGGATTGCCTCTCTATGAATATATGGAAACGGATCCAACTTTGAAACCTTTGTTCCACAAGACAATGGCAGATATCTCTACTATGCATATGAGGCAGATTCTTGAAAAGTATGAAGGATTTGATGGAATATCAACACTTGTTGATGTGGCTGGTGGTATTGGGCAAAGCCTCAAGATGATCACTTCTAAGTACCCTCACATAAAGGGTATTAACTTTGACCTGCCTCATGTGGTAGAGCATGCTCCACCTCACCCAGACATTGAGCATGTTGGTGGGAATATGTTCAAAAGTGTACCAGAAGGAGATGCCATAATGATTAAGGCCACAACTCACAATTGGTCTGACGAAGATTGCATAAAATTTTTGAAAAACTGCCATAAATCCCTAAAAGATGGTGGCAAGGTTATCGTCATGGATTTGATAATGCCAGAATTACCAGATGCAACAGATGGTGATAAGTATGCTGCTATTCTGGACAACGTTATGTTTCTGCTACCTGGAGGCAAGGAAAGAACTTTGCAAGAGTTTGAATATTTATGCAAAGGTGCTGGGTTTTCAAGATATGAAGTTGCTTGTCGTGTGTTCTCTGGAGCAATGGGAGTTATTGAATTCTATAAATGA 1068 0.4064 MGSIENDYDACLHAMLQSSGQVYPAVLNAAIELNLFEIIDQAGSNSISPSQIASKLAIQHADTANRLDRMLFLLASYSLLTCSKSVNGDGRVERIYQLSSTGKYILNDKEGSSYATLARSCFHPAYISLWQNFKEVILDGEEDLFKKVHGLPLYEYMETDPTLKPLFHKTMADISTMHMRQILEKYEGFDGISTLVDVAGGIGQSLKMITSKYPHIKGINFDLPHVVEHAPPHPDIEHVGGNMFKSVPEGDAIMIKATTHNWSDEDCIKFLKNCHKSLKDGGKVIVMDLIMPELPDATDGDKYAAILDNVMFLLPGGKERTLQEFEYLCKGAGFSRYEVACRVFSGAMGVIEFYK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00125 355 SUPERFAMILY "Winged helix" DNA-binding domain 6 109 IPR036390 -
Bach1g00125 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 341 IPR029063 -
Bach1g00125 355 CDD AdoMet_MTases 194 291 - -
Bach1g00125 355 FunFam Caffeic acid 3-O-methyltransferase 2 105 - -
Bach1g00125 355 PIRSF O-mtase 2 355 IPR016461 GO:0008168
Bach1g00125 355 PANTHER O-METHYLTRANSFERASE 19 342 IPR016461 GO:0008168
Bach1g00125 355 Gene3D Vaccinia Virus protein VP39 106 355 IPR029063 -
Bach1g00125 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 355 IPR016461 GO:0008168
Bach1g00125 355 Pfam O-methyltransferase domain 130 335 IPR001077 GO:0008171
Bach1g00125 355 Gene3D - 2 105 IPR036388 -
Bach1g00125 355 Pfam Dimerisation domain 26 75 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00125 Bach-Chr1 1611974 1613688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00125 6 355 Monolignol Biosynthesis Gene Families AT5G54160 48.580 1.22e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00125 - - qsu:112031144 410.994