Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00124 ATGGGTTTCATTGGAAATGATTATGATGCATGCCTTGACGCCATGCTGCTATCCAGTGGTCAAGTTTATCCTGCTGTGTTGAATGCTGCCATTGAGCTCAATCTGTTTCAGATCATTAACCAGGCAGGCCCCGTGGGCATATCTCCCTCTGAGATTGCTTCTAAACTTGCCACTCAACACGCAGACACAGCTAATAGGCTTGACCGCATGCTGTTTCTGCTTGCTAGTTACTCTCTTCTCACTTGCTCAAAGCGAGTCAATGAAGATGGTAGGTTTGAGAGACTTTATCAACTCTCTCCCACTGGTAAATATTTACTAGACGACAATGAGGGATCCTCATATGCTACGCTTTCCAGGATGTGTTTCCACCCAGCTTATTTAACACTTTGGCAAAATTTTAAGGAGGTTATTCTTGATGGTGAAGAGGGTTTATTCAAGAAAGTACATGGATTACCTCTCTTTGAATATATGGAAACGGATCCAACTCTAAAACCTTTGTTCCACAAGACAATGGCAGATCTCTCTACTATGCATATGAGGCAGATTCTTGAAAAGTATGAAGGATTTGATGGAATATCAACACTTGTTGATGTGGCTGGTGGTATTGGGCAAAGCCTCAAGATGATCACTTCTAAGTACCCTCTCATAAAGGGTATTAACTTTGACCTGCCCCATGTGGTAGAGCATGCTCCACCTTACCCAGGTATATATTCTCTGGCTACAACTCATAATTGGTCTGATGAAGACTGCGTACAGATTTTGAAAAACTGCTATAAATCCCTAAAAGATGGAGGCAAGGTGATCATCATGGATTTAATAATGCCAGAATTGCCAAAGGCAACTGATGGTGATAAGTATGCTGCTATTCTTGACAACGTCATGTTTCTGCAACCTGGAGGCAAGGAAAGAACTCTGCAAGAGTTTGAATATTTACGCAAAGGTGCTGGGTTTTCAAGATATGAAGTTGTTTGTCGTGTGTTCTCTGGAGCCTTGGGAGTTATTGAATTCTATAAATAA 1017 0.4159 MGFIGNDYDACLDAMLLSSGQVYPAVLNAAIELNLFQIINQAGPVGISPSEIASKLATQHADTANRLDRMLFLLASYSLLTCSKRVNEDGRFERLYQLSPTGKYLLDDNEGSSYATLSRMCFHPAYLTLWQNFKEVILDGEEGLFKKVHGLPLFEYMETDPTLKPLFHKTMADLSTMHMRQILEKYEGFDGISTLVDVAGGIGQSLKMITSKYPLIKGINFDLPHVVEHAPPYPGIYSLATTHNWSDEDCVQILKNCYKSLKDGGKVIIMDLIMPELPKATDGDKYAAILDNVMFLQPGGKERTLQEFEYLRKGAGFSRYEVVCRVFSGALGVIEFYK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00124 338 FunFam Caffeic acid 3-O-methyltransferase 3 105 - -
Bach1g00124 338 Gene3D Vaccinia Virus protein VP39 106 240 IPR029063 -
Bach1g00124 338 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 338 IPR016461 GO:0008168
Bach1g00124 338 PANTHER O-METHYLTRANSFERASE 15 325 IPR016461 GO:0008168
Bach1g00124 338 Gene3D - 5 105 IPR036388 -
Bach1g00124 338 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 325 IPR029063 -
Bach1g00124 338 Gene3D Vaccinia Virus protein VP39 242 326 IPR029063 -
Bach1g00124 338 PIRSF O-mtase 239 338 IPR016461 GO:0008168
Bach1g00124 338 PIRSF O-mtase 5 240 IPR016461 GO:0008168
Bach1g00124 338 Pfam Dimerisation domain 26 75 IPR012967 GO:0046983
Bach1g00124 338 Pfam O-methyltransferase domain 130 233 IPR001077 GO:0008171
Bach1g00124 338 Pfam O-methyltransferase domain 242 318 IPR001077 GO:0008171
Bach1g00124 338 SUPERFAMILY "Winged helix" DNA-binding domain 7 109 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00124 Bach-Chr1 1600679 1602379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00124 6 338 Monolignol Biosynthesis Gene Families AT5G54160 44.886 4.87e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00124 - - qsu:112031144 386.341