Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00109 ATGAAGAAGGCAAGCATAGGAACAAAAGCTTCAGCAAAATCGATTATGGTTTTGCCGCATCAAACCCCACGACTCAGAGACCACTACCTTCTCGGCAAGAAGCTTGGGCAAGGTCAGTTTGGCACCACATACCTCTGCACCCAAAAATCCACAGGGAAGCTCTATGCGTGCAAATCGATCCCAAAACGAAAGCTTTTGTGCAAAGAAGATTACGACGATGTGTGGAGAGAGATTCAAATCATGCATCATTTGTCTGAGCACCCAAATGTGGTTCGGATACAGGGAACCTATGAGGACTCTGTGTTTGTGCACCTGGTTATGGAGCTATGTGCTGGGGGTGAGCTTTTTGATAGGATCATTCAAAAGGGGCATTATAGTGAGAGAGAGGCTGTCAAGTTGATAAAGACTATAGTGGGGGTGGTGGAAGCTTGTCACTCTCTAGGGGTCATGCATAGGGATCTCAAGCCCGAGAATTTCTTGTTTGATAGCCCTGGTGAAGATGCCCAGATGAAGGCTACAGATTTTGGGTTGTCCGTGTTCTACAAGCCAGGACAATATTTTAGTGATGTAGTTGGAAGTCCCTACTATGTTGCCCCTGAGGTGTTGTGCAAGCTTTATGGACCAGAAATAGATGTATGGAGTGCTGGTGTTATCCTTTACATCTTATTGAGTGGGGTGCCACCTTTTTGGTCCGAAACTGAAGCAGGAATTTTCAAACAGATATTACATGGAAAGCTAGATTTTGAATCTGAACCTTGGCCAAGCATCTCAGAAAGTGCTAAAGATTTGGTAAAACAGATGCTTGAAAGGGACCCTAAGAAAAGAATTTCTGCTCATGAAGTCTTATGTCACCCTTGGATTGTCGATGAAGAAGTCGCTCCTGACAAACCTCTGGATTCTGCAGTTTTGTCACGCCTGAAGCATTTCTCTGCGATGAATAAACTTAAGAAGATGGCACTGCATGTTATAGCAGAAAGACTTTCAGAGGAAGAAATTGGTGGTCTGAAAGAATTGTTCAAAATGATTGACACAGACAACAGTGGGACGATAACCTTTGAGGAGCTTAAAGAAGGTCTGAAAAGAGTGGGTTCTGATCTAATGGAATCTGAAATTAGATCCCTAATGGACGCGGCTGATATAGACAATAGTGGAACAATAGACTATGGTGAATTTCTTGCTGCTACACTGCACTTAAATAAGATTGAAAGGGAGGACAATTTAGTCGCAGCTTTTACCTATTTTGACAAAGATGCTAGTGGTTACATCACTGTTGATGAGCTTCAACAGGCATGCCAAGACTTTGGCCTTGGTGATGTCCCTTTAGATGAAATACTCAAAGAGATTGATCAAGACAATGATGGAAGAATTGATTATGGGGAATTTGTTGCAATGATGAAGCAGGGTGATGGGGGTGTTGGTAGGAGCAGAACCATTAAAGGCAATTTGAACTTCAATATAGCTGATGCCTTTGGAGTAAAGGAAAGATCATCCTAAAACCCTAACCCAAAATGATCTCTTGTACAGTTAGGAAGCTTGACTGGAGAAGGAAAGCCTTTGTGAAAAAGTTTAATTTCATGGATTGATAGC 1587 0.4247 MKKASIGTKASAKSIMVLPHQTPRLRDHYLLGKKLGQGQFGTTYLCTQKSTGKLYACKSIPKRKLLCKEDYDDVWREIQIMHHLSEHPNVVRIQGTYEDSVFVHLVMELCAGGELFDRIIQKGHYSEREAVKLIKTIVGVVEACHSLGVMHRDLKPENFLFDSPGEDAQMKATDFGLSVFYKPGQYFSDVVGSPYYVAPEVLCKLYGPEIDVWSAGVILYILLSGVPPFWSETEAGIFKQILHGKLDFESEPWPSISESAKDLVKQMLERDPKKRISAHEVLCHPWIVDEEVAPDKPLDSAVLSRLKHFSAMNKLKKMALHVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKEGLKRVGSDLMESEIRSLMDAADIDNSGTIDYGEFLAATLHLNKIEREDNLVAAFTYFDKDASGYITVDELQQACQDFGLGDVPLDEILKEIDQDNDGRIDYGEFVAMMKQGDGGVGRSRTIKGNLNFNIADAFGVKERSS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00109 497 FunFam Calcium-dependent protein kinase 1 31 114 - -
Bach1g00109 497 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
Bach1g00109 497 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Bach1g00109 497 Gene3D - 312 470 - -
Bach1g00109 497 SUPERFAMILY EF-hand 326 465 IPR011992 -
Bach1g00109 497 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Bach1g00109 497 Pfam Protein kinase domain 31 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00109 497 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Bach1g00109 497 FunFam Calcium-dependent protein kinase SK5 115 299 - -
Bach1g00109 497 Gene3D Phosphorylase Kinase; domain 1 30 114 - -
Bach1g00109 497 ProSiteProfiles EF-hand calcium-binding domain profile. 441 471 IPR002048 GO:0005509
Bach1g00109 497 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Bach1g00109 497 SMART efh_1 334 362 IPR002048 GO:0005509
Bach1g00109 497 SMART efh_1 406 434 IPR002048 GO:0005509
Bach1g00109 497 SMART efh_1 370 398 IPR002048 GO:0005509
Bach1g00109 497 SMART efh_1 440 468 IPR002048 GO:0005509
Bach1g00109 497 CDD STKc_CAMK 28 286 - -
Bach1g00109 497 Gene3D Transferase(Phosphotransferase) domain 1 115 311 - -
Bach1g00109 497 CDD EFh 335 394 IPR002048 GO:0005509
Bach1g00109 497 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 461 - -
Bach1g00109 497 ProSiteProfiles Protein kinase domain profile. 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00109 497 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
Bach1g00109 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Bach1g00109 497 ProSiteProfiles EF-hand calcium-binding domain profile. 330 365 IPR002048 GO:0005509
Bach1g00109 497 SUPERFAMILY Protein kinase-like (PK-like) 25 297 IPR011009 -
Bach1g00109 497 FunFam Calcium-dependent protein kinase 1 295 469 - -
Bach1g00109 497 Pfam EF-hand domain pair 335 395 IPR002048 GO:0005509
Bach1g00109 497 Pfam EF-hand domain pair 407 466 IPR002048 GO:0005509
Bach1g00109 497 ProSitePatterns EF-hand calcium-binding domain. 343 355 IPR018247 -
Bach1g00109 497 SMART serkin_6 29 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00109 Bach-Chr1 1452157 1456158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00109 14 492 EF-hand Containing Proteins AT1G35670 84.551 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bach1g00109 Pkinase 4.2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00109 K13412 - zju:107430482 882.093