Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00100 ATGACGATCATGAATCTTCTCGTATTTTTGTTTTCTCTGTTGACTGGATGTTATATGGCGGCAGCTAAAGTGGTGCTCATTGGGAACAATGTCACTCTTTCCTTCGACGCTATTGAAGCTAATTTCTCTCCAACAATCCAAGGATCTGGTGAATGCGGGGTATTATATTTGGCTGAGCCTCTTGACGCTTGTACAGCATTGTCAAATAAAGTTGGACAACATTCAAATGTGAGTAACCCTTTTATTTTGATTGTTCGAGGAGGATGTAGCTTTGAGGAAAAGGTGAGAAGAGCACAAAAGGCCGGCTTCAAAGCTGCAGTTGTCTATGATAATGAAGATGATGGTATCTTAGTAGCAATGGCAGGAAACTCAGCTGGCATAAAAATACATGCTGTATTTGTTTCTAAAGCTTCGGGCAAAATCCTAAAGAAATACACTGGATTGACTAACATGGAATTGTGGCTAATTCCAAGTTTTGAAAATTCAGCATGGTCTATTATGGCCATTTCATTCATTTCCCTACTAGCCATGTCTGCAGTGCTGGCCACCTGTTTCTTTGTCCGAAGACATCGCATAAGAAGAGAAAGGCCGCAAGCTTCTCGTGTCCGTGAATTCCATGGAATGAGTAGTCGTCTAGTGAAAGCAATGCCAAGTTTGACATTTACTGCTGTTTTAGGGGATAATTCTACATCAAGAACTTGCGCAATATGCCTTGAAGACTATAATGTTGGAGAGAAGCTCAGGATTCTTCCCTGCTGTCACAGGTTTCATGCTATGTGTGTCGATTCTTGGCTTACTTCATGGAGAACCTTCTGTCCTGTTTGCAAGCGTGATGCAAGAACTGGTTTAAGTGATCCGCCACCTTCAGAATCCACACCTTTGCTTTCATCGGCATCCTCTTTGGTGTCATCTGCAAGATCATCATTTGTGTCATCATCGGCTATACATATTGTCCCAGCAACATCGCGATCTCCATCTGTTTCTCGTAATCACTCTCTTGCTAGTACCCCTTATGTTCAGCCGTCTCTTAGGTCCTTCCACCAATCCCCCTCTGTAAGTATCAGCCGAAGCTCAGTAGATCTTAGGAATGCATCCCAAAGATCACGAGCTTCACATTTGATTTCTCCCCATTCTATGGGCTACCCATCTTTATCATCTCTGAACTCAAGGTACATCTCTCCACATATACTGAGTTCAAGCAATGCTTCAGCAAGTTTTCTTGCTTCTTCTAGTCATCATCAGAACCCACTTCATTATAGTGAATCAGCTACTAGTTTTTCTCCATTTGCTTCTGCCCATTCTCTTCCAGAATGCTAA 1317 0.4237 MTIMNLLVFLFSLLTGCYMAAAKVVLIGNNVTLSFDAIEANFSPTIQGSGECGVLYLAEPLDACTALSNKVGQHSNVSNPFILIVRGGCSFEEKVRRAQKAGFKAAVVYDNEDDGILVAMAGNSAGIKIHAVFVSKASGKILKKYTGLTNMELWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPQASRVREFHGMSSRLVKAMPSLTFTAVLGDNSTSRTCAICLEDYNVGEKLRILPCCHRFHAMCVDSWLTSWRTFCPVCKRDARTGLSDPPPSESTPLLSSASSLVSSARSSFVSSSAIHIVPATSRSPSVSRNHSLASTPYVQPSLRSFHQSPSVSISRSSVDLRNASQRSRASHLISPHSMGYPSLSSLNSRYISPHILSSSNASASFLASSSHHQNPLHYSESATSFSPFASAHSLPEC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00100 438 SUPERFAMILY PA domain 75 144 IPR046450 -
Bach1g00100 438 CDD PA_C_RZF_like 20 163 IPR044744 -
Bach1g00100 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 281 IPR013083 -
Bach1g00100 438 SMART ring_2 234 275 IPR001841 -
Bach1g00100 438 Pfam Ring finger domain 233 276 IPR001841 -
Bach1g00100 438 SUPERFAMILY RING/U-box 214 288 - -
Bach1g00100 438 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 158 291 - -
Bach1g00100 438 Gene3D - 20 154 - -
Bach1g00100 438 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 22 156 - -
Bach1g00100 438 FunFam Receptor homology region transmembrane domain-and RING domain-containing protein 2 194 281 - -
Bach1g00100 438 ProSiteProfiles Zinc finger RING-type profile. 234 276 IPR001841 -
Bach1g00100 438 Pfam PA domain 62 142 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00100 Bach-Chr1 1209642 1213919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00100 21 437 C3H Transcription Factor Family AT1G22670 47.073 1.57e-117 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00100 K15692 - qsa:O6P43_007998 633.254