Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00095 ATGGTGGCCAGCAAAGTGGAAGTTAAAGCAAAGAAAAGGACTCCAAAGGGGCATTTTGTGGTCTACGTGGGCACTGAACTGACGAGGTTTGTGGTTCCTATGAGTTACCTCAAGAACCCCACCTTTCAGAGATTGCTCGAGAAAGCTGCAGATGAGTATGGTTTCGATAACCCAGATGGGATCGTTCTGCCTTGTGATGCATCTACCTTCCAGAGGATCATTACTTTCTTGGAAAAATTGTCTGAAGAGGTTCCCTGGTGGTGCATCGTATTTCTGTGTCAGGATTTCAGGCCATATTTGGATAGAGCCATGTCTGGCAGCTCAGGTTGCACTGTTTATATAGGCAATCTAGATGAGAGGGTGACCGAACGAGTCTTGTATGATATTTTGATTCAAGCAGGTCGAGTGGTAGACCTGTACATTCCTAAGGACAAGGAATCAGAGAAACCCAAAGGCTTTGCTTTTGCAGAATATGAAACTGAGGAGATTGCAGACTATGCTGTCAAGCTTTTCTCTGGTCTTGTGACAATCAACAAAAGAACTCTAAAGTTTGCGATATCTGGGCAAGACAAACCTACCTCAAATGCCTATACAGCAATCACACCCTCATCAAATTCTTCCCAGAGATCAAGGCCCTCAATAAATAGTAATACGGAAATTTCTCAGCACTCTGCTAGGTTATCAACATCTGGCCGATTTTCTGAATACAATCATTCCCAAGTTTCCCCCCATGTATTTGACCAATCTAGTGGGTATGGATCACGCTACAATGGCAACAATTATGATTACAGTCGAAGGGTTTTGGGGGCGACATTGGATAGCATTAGCCATTCTAGGTCCCGCCGCTATGATACAAGTAACCCAATCTCATATCCATCGTACTAATACTTTAAGAAGATTGTGAGAGATTAAATTTACCTTAATTAGTAACCATGACTAAGTAACATGACTAGCAGTTGTGAAGTCTCTTTAGAATGTGAATGGATGACGCCCTAGTTGAATGAATTATCTATAAGCTGAGCTGTTCTTTTAAATGTACCAGCTAAGGTCATTACGTACTACCTGATTAAGATGTGTCAAGCATTTATAAACTTATTTATCGTAGATACTAGTGGGAAAAAAAAACTTTATGATTGACTAAACACTTGTACCTTCTTTATCTGCAAAGAATACTCTTGCGTTACTTCAGTACACTAAAGTCTGAAATTAAGTGTTTTTTTTTTTGTGCTTTTGGTTCTGCTTTTGTGCTTCTATGTTAAAGCTGTATCACTCAATGGATGATCTTTATACATTGGTCTGGCTTGTCGAACCTATGAACATATTAGAGTTTGTTTGGATTTTTTTTTTTTGTTTTTTTTTGGACTAGAAGTGCTTTTGGCATTAAAAAACATTAATATGTAATTTTTGAGTATTTAAATTATCTTTTGAAAGAAAAAGTAGAAGTGCCTCTAAATGTCAAAACACTAGCTTTTTTTCAAAAGCATAAGTCAACCATTGTTTATGTATTTGTTCTACTGCTCGAACTGTTTATTTTTTTGCTTCTACATTTCAAAAGCATTTTAGCATTTTGAAAAACCAATCTCAACGGGCTTACTTTAATTTGACTGATGGGTGTAATTGAATTCATGTGTGGCATTCTTGCTTATAACATTGAACTATTGGAGTTTAGCGGCTGTAGCTTGTCA 1685 0.3786 MVASKVEVKAKKRTPKGHFVVYVGTELTRFVVPMSYLKNPTFQRLLEKAADEYGFDNPDGIVLPCDASTFQRIITFLEKLSEEVPWWCIVFLCQDFRPYLDRAMSGSSGCTVYIGNLDERVTERVLYDILIQAGRVVDLYIPKDKESEKPKGFAFAEYETEEIADYAVKLFSGLVTINKRTLKFAISGQDKPTSNAYTAITPSSNSSQRSRPSINSNTEISQHSARLSTSGRFSEYNHSQVSPHVFDQSSGYGSRYNGNNYDYSRRVLGATLDSISHSRSRRYDTSNPISYPSY 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00095 294 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 110 189 IPR000504 GO:0003723
Bach1g00095 294 SUPERFAMILY RNA-binding domain, RBD 91 183 IPR035979 GO:0003676
Bach1g00095 294 Gene3D - 103 199 IPR012677 -
Bach1g00095 294 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 104 291 - -
Bach1g00095 294 MobiDBLite consensus disorder prediction 195 229 - -
Bach1g00095 294 Pfam Auxin responsive protein 9 77 IPR003676 GO:0009733
Bach1g00095 294 SMART rrm1_1 111 185 IPR000504 GO:0003723
Bach1g00095 294 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 112 183 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00095 Bach-Chr1 1179222 1184938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00095 15 78 Calmodulin-binding Proteins AT3G43120 45.312 4.02e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00095 K12831 - gmx:100803118 277.715