Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach1g00054 | ATGGAAGTCGTATCGGTATCTGTTTCGCGCACATTTAGCAATTCGAACACTCTATCCATTTTCAGACCTCAAACCACCCAAATTCAGGGTCTTTCAGTAACCATTCGATTACCCAAGTCACCCAAGAGCAATTTCCATCTTTCTTCTTCTTATACTTCTTATTCTTTAATCCCCTTATATTATTTCTCTACTAGGATAGCTGCAACTTCAGCAGCGACTTCTAGTTCTACTTCCTACACCTCTTCTTCTTCCACTAGGGACAACCGCCATTGGATGGTGATAATGGAGAGGCCTGTGCAAGGGGTCAGTTCTAAGGCAGAAGTCATTGATTATTATGTGAAGACTCTTCAAAGAGTTTTGCGAAGTGAGAAAGACGCTCAAATGTGCATATATGATGCTTCCTGGGAGACCCAATTCGGTTTTTGTTGTGACATAGAAGAAGAAACTTCCTCCCAGCTTGCCCGTTTACCTGGAGTCTTATCAGTAAGGCCTGATCCAGATTTCAACTCCTTAGAGAAGCATTATGGTTCATCAAATGGCCAGGCAGATAATCTGTCAAATCTACAAATGGGACCAGCTTTGCTGTTTCCTGCGGGGCATTCCAAACACTGGCTTGTTAGAATGGATAAACCTGGGGTTGGGGTTGTTACAAAGGCCCAAATTGTTGATTATTATGCTCAAATACTGACCAAGGTCTTGGGAAATGAGAAGGATGCACAAATGTGTGTATACCATGTTTCCTGGAAAACAAACTTTGGCTTTTGTTGTGAACTTGATGAGGATTGTGCACGGGAACTAGCTGGAGTGCCAGGGGTCCTATCAGTTCAGCCAGATAATAATTTTGAGTCAGAAAATAAGGATTATGGAGGTACTAATTTGGAAAACAGTTTGAATGTGCTGAACTCTTCTGAAGCAAGTCAGGCGGCCCCTATAAAAACAAAAAAACTTTTTGTGACAGGCCTTTCATTTTATACATCCGAGAAAACCTTACGTGCAGCATTTGAAGGCTTTGGTGAGCTTGTTGAAGTTAAAGTTATTATGGATAAAATTTCTAAAAGGTCCAAGGGTTATGCATTTGTGGAATATACAAAAGAGGAGGCCGCAAGTGCAGCACTGAAGGAGATGAATGGCAAGATTATCAATGGTTGGATGATAGTTGTTGATGTTGCCAGGAGTAACCCTCCAAAATACGGTAGAGATCATGCAAGATCAGCAGCCTGA | 1221 | 0.4169 | MEVVSVSVSRTFSNSNTLSIFRPQTTQIQGLSVTIRLPKSPKSNFHLSSSYTSYSLIPLYYFSTRIAATSAATSSSTSYTSSSSTRDNRHWMVIMERPVQGVSSKAEVIDYYVKTLQRVLRSEKDAQMCIYDASWETQFGFCCDIEEETSSQLARLPGVLSVRPDPDFNSLEKHYGSSNGQADNLSNLQMGPALLFPAGHSKHWLVRMDKPGVGVVTKAQIVDYYAQILTKVLGNEKDAQMCVYHVSWKTNFGFCCELDEDCARELAGVPGVLSVQPDNNFESENKDYGGTNLENSLNVLNSSEASQAAPIKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTKEEAASAALKEMNGKIINGWMIVVDVARSNPPKYGRDHARSAA | 406 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach1g00054 | 406 | FunFam | Organelle RRM domain-containing protein 1, chloroplastic | 192 | 281 | - | - | |
Bach1g00054 | 406 | Gene3D | - | 290 | 406 | IPR012677 | - | |
Bach1g00054 | 406 | FunFam | Organelle RRM domain-containing protein 1, chloroplastic | 282 | 406 | - | - | |
Bach1g00054 | 406 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 316 | 382 | IPR000504 | GO:0003723 | |
Bach1g00054 | 406 | SMART | rrm1_1 | 315 | 388 | IPR000504 | GO:0003723 | |
Bach1g00054 | 406 | SUPERFAMILY | RNA-binding domain, RBD | 303 | 399 | IPR035979 | GO:0003676 | |
Bach1g00054 | 406 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 197 | 282 | IPR037045 | - | |
Bach1g00054 | 406 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 72 | 169 | IPR037045 | - | |
Bach1g00054 | 406 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 314 | 392 | IPR000504 | GO:0003723 | |
Bach1g00054 | 406 | PANTHER | MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED | 194 | 383 | IPR039206 | GO:0016554 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach1g00054 | Bach-Chr1 | 615360 | 618556 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach1g00054 | 311 | 400 | C2H2 Transcription Factor Family | AT2G19380 | 35.556 | 1.17e-12 | 67.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach1g00054 | - | - | qsa:O6P43_004903 | 573.548 |