Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00051 CAGCTTTTGCTTCTGCTTTCACTTGGAGCTAATTTTCTCCCTCTTCACCGAATTCCCAATTCTGCCTAGTTAAAAAGTTCTTGCATTGCAACGCAAATATTGCTGCAGCCCTTTACAAGAAGAACAGATTGAATTCTTCACATACTCTCATTTTTTGGATATCAGAATACTATGGAAATCACTAGCACCCCTAACGGAAGTAGTAGCATGATGTGGTTTTTTAAGGATAGAGGTTTTGATGATAAAAGCATACAAGGCATGTTCAGGAGGTGCAGGCGTCTGGAGGGTGCTCGTCAGGAAAGGGCATCTGAGAACTGGGCTTATTTGAAAAGCATTGGCATTCAAGAGAGGAAACTCCCTTCTATTATCTCAAAATGCCCCAAGATTCTTGTGCTTGGTCTTAATGAGAAGATTGCGCCCATGGTTCAGTGTCTTATGACACTTGGAACAAAACCCAATGAAGTTGCTTCAGCCATAGCTAAGTTTCCTCACATACTCTCACATAGTGTGGAAGAGAAGCTTTGCCCCCTTTTGGCCTTCTTTCAAGCATTGGGCGTTCCTGAAAAGCAACTTGGCAAAATGATATTGCTCAACCCGAGGCTTGTAAGTTACAGCATTGAAACAAAGTTGACGGAAACTGTGGATTTCCTTGCTAGCCTTGGTCTAAATAAAGATGGAATGATTGGAAAAGTTTTAGCTAGGCACCCCTTCATTATGGGTTATAGCGTTGATAAAAGGCTACGCCCTACTTCAGAGTTTTTGAAGTCAATAGGTCTGACTGAGCTTGATCTTCAAGTAGTGGCGGTGGACTTCCCTGAAGTTCTGAGTAGAGATGTGAACAAAGTTTTGTTACCAAATTATACTTATTTGAGGAGATGTGGATTTCAAGACCAACAGATTGTTTCTTTGGTGGTTGGTTATCCTCCAATCCTGATCAAGAGCATCCAGAATTCCTTAGAACCCAGGATCAGGTATTTGAGAGATGTAATGGGAAGACAAATTGATGAAGTCGTAGATTGTCCTTGCTTCTTTCGTCATGGTTTGAAGAAATCATTGGAGGTGCGGTATAAATTTCTGCAGAAGAGGAACTTAAATTGTAGCCTTAGTGAAATGCTGGAATGTAATAAGAAGAAGTTCTTCATGAAGTTTGGTTTATTTGAAGGGTATGCCTTGAGTAACTAGATGGAAATCACTAGCACCCCTAACGGAAGTAGTAGCATGATGTGGTTTTTTAAGGATAGAGGTTTTGATGATAAAAGCATACAAGGCATGTTCAGGAGGTGCAGGCGTCTGGAGGGTGCTCGTCAGGAAAGGGCATCTGAGAACTGGGCTTATTTGAAAAGCATTGGCATTCAAGAGAGGAAACTCCCTTCTATTATCTCAAAATGCCCCAAGATTCTTGTGCTTGGTCTTAATGAGAAGATTGCGCCCATGGTTCAGTGTCTTATGACACTTGGAACAAAACCCAATGAAGTTGCTTCAGCCATAGCTAAGTTTCCTCACATACTCTCACATAGTGTGGAAGAGAAGCTTTGCCCCCTTTTGGCCTTCTTTCAAGCATTGGGCGTTCCTGAAAAGCAACTTGGCAAAATGATATTGCTCAACCCGAGGCTTGTAAGTTACAGCATTGAAACAAAGTTGACGGAAACTGTGGATTTCCTTGCTAGCCTTGGTCTAAATAAAGATGGAATGATTGGAAAAGTTTTAGCTAGGCACCCCTTCATTATGGGTTATAGCGTTGATAAAAGGCTACGCCCTACTTCAGAGTTTTTGAAGTCAATAGGTCTGACTGAGCTTGATCTTCAAGTAGTGGCGGTGGACTTCCCTGAAGTTCTGAGTAGAGATGTGAACAAAGTTTTGTTACCAAATTATACTTATTTGAGGAGATGTGGATTTCAAGACCAACAGATTGTTTCTTTGGTGGTTGGTTATCCTCCAATCCTGATCAAGAGCATCCAGAATTCCTTAGAACCCAGGATCAGGTATTTGAGAGATGTAATGGGAAGACAAATTGATGAAGTCGTAGATTGTCCTTGCTTCTTTCGTCATGGTTTGAAGAAATCATTGGAGGTGCGGTATAAATTTCTGCAGAAGAGGAACTTAAATTGTAGCCTTAGTGAAATGCTGGAATGTAATAAGAAGAAGTTCTTCATGAAGTTTGGTTTATTTGAAGGGTATGCCTTGAGTAACTAGGTCTGTCCCCATTTTTTTTTTTTTGAATTTTCTAAACCTAGACAAGTTCTATAATCTAAGTCATAGTCTATATTCTATTCTCTGAATGTCCGATGTGGGGTGCTTTGGCT 2303 0.4077 MEITSTPNGSSSMMWFFKDRGFDDKSIQGMFRRCRRLEGARQERASENWAYLKSIGIQERKLPSIISKCPKILVLGLNEKIAPMVQCLMTLGTKPNEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLVSYSIETKLTETVDFLASLGLNKDGMIGKVLARHPFIMGYSVDKRLRPTSEFLKSIGLTELDLQVVAVDFPEVLSRDVNKVLLPNYTYLRRCGFQDQQIVSLVVGYPPILIKSIQNSLEPRIRYLRDVMGRQIDEVVDCPCFFRHGLKKSLEVRYKFLQKRNLNCSLSEMLECNKKKFFMKFGLFEGYALSN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00051 336 Gene3D Transcription termination factor 3, mitochondrial 87 330 IPR038538 -
Bach1g00051 336 SMART mt_12 244 276 IPR003690 GO:0003690|GO:0006355
Bach1g00051 336 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Bach1g00051 336 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Bach1g00051 336 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Bach1g00051 336 SMART mt_12 28 58 IPR003690 GO:0003690|GO:0006355
Bach1g00051 336 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Bach1g00051 336 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Bach1g00051 336 SMART mt_12 63 94 IPR003690 GO:0003690|GO:0006355
Bach1g00051 336 PANTHER CGI-12 PROTEIN-RELATED 133 254 IPR003690 GO:0003690|GO:0006355
Bach1g00051 336 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 98 330 - -
Bach1g00051 336 Pfam mTERF 102 322 IPR003690 GO:0003690|GO:0006355
Bach1g00051 336 Pfam mTERF 14 124 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bach1g00051 mTERF 4.3e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00051 K15031 - gmx:100816929 551.977