Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00035 CTTCTCTCTCCCCTGTCTCCTGAACTCGGTTCCTCCGGTCGGCAACAACGGAGCCCACATTTGTGCCGGAATTTCTCTTCGCTTAGCGCTTGGGAGCGGAGGAACGCCGTCGTCTTCCTGAGAAACCGCTTTTACATGGTGGAAAAACGGATTTTATAGACCAAGTCAAGTTCTTTGAGTTGATGAAGTAGTTGTTTTGACTTGGAATTGTCAATGGAGTTGATGGGGTTGTGGGTTTTGGGAAGAGGAACAGATCTGCAAAGCTTTGTGTATTTCTAGAGCGTGAAAGAAGTATTTTTGTTTGAGAGAGGGAGAGGTTTCGGTTCGGTTGTGAAAGTTAATGGTAGTGGACCGGAGAGGTTGTAGTGGTTTATCATGACCGGAGCTCTGGCCAGCGATCACAGAGGGTGGTGGCGTTTCGGTCAATCTCTCACATGGAATGGCAGATCTTGCTAGCTACGGGAATGCTGACCGTGACATCGAGCAGGAAGAAAGGATAGGACCATCAGTTTTGGTGCTAATACAAGAAACGGAAGAGAGAAAGAGAGCATTGATTTCTTTGAAAAAGGGTGCTCAACTGCTTAAATATGGTCGTAAGGGAAAGCCCAAGTTTTGCCCATTTAGAGTTTCCAGTGATGAATCATCTTTAATCTGGATTTCAAGTAGTGGAGAAAAAAGCTTGAAGCTATCTTCTGTTTCAAGAATTATTCCTGGACAAAGAACTGTTATTTTCCAACGTTATCTGCGTCCTGAGAAGGATTATTTGTCTTTTTCACTTATTTATAACAACGGAAAGCGGTCCCTTGATCTGATTTGCAAGGATAAAGTTGAGGCAGAAGCGTGGATTGCAGGCCTCAAGGCACTGATATCTTCTGCTCAAGGTGGGCGGTCCAAAATTGACGGATGGACTGATGGGGGTCTCTATCTTGATGATAGCAGAGACTTGACTTCAAATAGTCCAAGTGAAAGTTCAGTTAGGACCTCACGAGATATTAGTTCTCCTGACGTTTCTGTGAGTCTTAATCCAAATACTTCTCCAAAGAGCTTTCAGCCTGAGGGTACTGTGAATTCTGAACGGTCACATGCACCATCAGAGTCATCAAACATGCAAGTGAAAGGATCTAGTTCAGATGCTTTTCGTGTAAGTGTTTCAAGTGCCCCCAGCACATCTAGTCATGGGTCTGCACCTGATGATTGTGATGCTCTTGGGGATGTATACGTATGGGGAGAGGCCATCTGTGAGAATATTGTGAAAATTGGTGCTGATAAAAATGCCAGTTACTTCGGCCCTAGGGCAGATGTACTTCTCCCCAAACCACTGGAATCCAATGTAGTTTTAGATGTACATCATATAGCATGTGGGGTTAAACATGCTACTCTAATCACGAGGCAAGGTGAAGTTTTTACATGGGGTGAAGAATCTGGAGGACGTCTTGGCCATGGTGTTGGCAAGAATGTGGTTCAACCTCGTCTAGTTGAAGCATTGGCTTCTACAACTGTTGATTTTGTTGCCTGTGGGGAGTTTCATACCTGTGCAGTTACAATGGCTGGGGACCTATATACTTGGGGTGATGGTACTCATAACGCTGGTCTTCTTGGTCATGGCACTGACATTAGTCATTGGATACCAAAGAGAATTGCAGGTCCTCTAGAGGGACTTCAAGTCACTTTTGTCACTTGTGGTCCTTGGCACACTGCCTTAGTAACTTCAACTGGGCAGCTATTTACATTTGGTGATGGAACATTTGGTGTCTTGGGTCATGGAGATAGGGAAAATGTTTCATACCCTAGAGAAGTGGAATCCTTATCGGGGTTGAGGACAGTAGCAGTGGCATGTGGAGTATGGCATACAGCTGCTGTGGTGGAGGTTATAGTGACACAATCCAGTGCAAGTGTATCATCAGGAAAATTGTTTACTTGGGGTGATGGAGACAAAAATCGCCTTGGACATGGAGACAAGGAGGCCCGGCTTAAACCAACTTGTGTTCCTTCTCTTATTGATTACAATTTTCATAAAATTGCCTGTGGGCACAGTTTAACTGTTGGCCTGACAACATCAGGACATGTTTTTACAATGGGCAGCACTGTTTATGGTCAACTTGGGAATCCTCAGTCTGATGGAAAGGTTCCTTACTTGGTTGAAGACAGGCTTGCTGGAGAAACTGTTGAAGAAATTGCCTGTGGTGCGTATCATGTTGCAGTTTTAACGTCCAAAAATGAAGTTTATACATGGGGGAAGGGTGCTAATGGGAGGTTAGGCCATGGAGATATTGAAGATAGAAAATCACCAACTTTAGTTGAAGCTTTGAAGGATAGACATGTGAAATATATTGCATGTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAATGGGTATCAGGTGCCGAGCAATCTCAATGCTCTGCTTGTAGACAGGCATTTGGGTTCACTAGAAAGAGGCACAATTGTTATAATTGCGGACTTGTGCATTGCCATTCCTGCAGTTCTAGGAAAGCATTAAGAGCAGCTCTGGCTCCTAATCCTGGCAAGCCATATCGTGTTTGTGATCCTTGTTATGCAAAATTGAACAAGGTAGCAGAGGTTGGTAATAATAATAATAGGAAGAATGCTATGCCTCGTTTGTCAGGTGAAAACAAGGATAGGTTAGATAAGTCGGAGTTAAGATTGTCCAAGTCAACAGTGCCTTCTAATATGGATTTGATCAAGCAGCTAGATAGTAAAGCTGCCAAACAGGGGAAGAAGGCTGATACATTCTCCTTAGTTCGTACCTCACAGGTACCTTCTTTGCTTCAGCTGAAAGATGTTGTCTTGTCTACTGCTGTAGATACGCGACGAACAGTTCCAAGACCTGTTCTTACACCATCTGGAGTTAGTTCCAGGTCTGTCTCCCCTTTCTCTAGAAGACCAAGCCCTCCTCGCTCTGCAACCCCTATTCCAACAACAACAGGACTTTCGTTCTCCAAAAGTATTACTGATAGTTTGAAGAAAACAAATGAACTTTTAAATCAAGAAGTGCTGAAGTTGCGTGCTCAGGTTGAGAGCTTGAAACAGAGATGTGAACTGCAAGAGGTAGAGCTTCAGAGGTCAGCAAAGAAAACTCAAGAAGCTATGGCAGTGGCTGCAGTGGAATCTGACAAATCTAAAGCTGCTAAAGAAGTTATAAAGTCACTCACAGCACAGCTCAAAGATCTGGCTGAGAGGCTCCCTCCTGGAGTTTATGATGCAGAGAATAATATCAGACCAGCTTATTTACCAAATGGCTTGGAGACAAATGGTGTCCATTATCCGGACTCAAATGGGGAGCATCACTCGAGAGCAGAGTCGATCAGCGGCTCTAGCATGGTCACTTTAGGAATGGAATCTTCTCTTTTGAACAGAAATGAGGGGAATCTTCCTGGAATCTATGGAACTAATTTGTACCAACAAAACCGGGCATCTGTGACCTCCAACGGGACAGATGAACACACAGATGATAGACTACCAAATGGTGGCAGTGCACTTCAGATAAGCAGCAGTAACGTGTTGGAGACTGTTGACGGAAGAAATTCCGGGCCTTTGCAAGATGACGAGAGTGGTTTGAGATCTAGGAATGCTCTAATGGCTGCTAGTACTAATCAAATAGAGGCTGAATGGATTGAACAGTATGAACCTGGTGTGTATATAACACTTGTGGCCCTCAAGGATGGTACTAGAGATCTAAAACGAGTGCGCTTCAGCCGGAGAAGATTCGGAGAGCACCAAGCAGAGACTTGGTGGTCGGAGAACCGGGAGAAGGTATATGAAAAGTATGATGTTAGGAGCACCGACAAGTCTCCCGGCCAAGCGGCGAGAAGGGCAGAGGGTGCTGCTTCACCTGTTTCCCAAGCATAGGGGAAATAGAGGGAGGGAAGTTCTCCATTAACAGATTTTGTTACAGTGAGCATAATTGTAGGAAGCAGGAATCAATACGAAGGAAGCAGGCACCCTTCTTTTTGGGTTATGTCTATCCTTTTTTTTCTTTTAAATCTTTTTTCTCTTAAATTAATTGTCTTCCATTTAATTCGGGTACATGCCCTTTACATATCGGTTGTATTGTAGTGTATATAGAATCATCAATTGAGATCATCTTGGCAAAAGAATC 4124 0.4401 MADLASYGNADRDIEQEERIGPSVLVLIQETEERKRALISLKKGAQLLKYGRKGKPKFCPFRVSSDESSLIWISSSGEKSLKLSSVSRIIPGQRTVIFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEAWIAGLKALISSAQGGRSKIDGWTDGGLYLDDSRDLTSNSPSESSVRTSRDISSPDVSVSLNPNTSPKSFQPEGTVNSERSHAPSESSNMQVKGSSSDAFRVSVSSAPSTSSHGSAPDDCDALGDVYVWGEAICENIVKIGADKNASYFGPRADVLLPKPLESNVVLDVHHIACGVKHATLITRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALASTTVDFVACGEFHTCAVTMAGDLYTWGDGTHNAGLLGHGTDISHWIPKRIAGPLEGLQVTFVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTVAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEARLKPTCVPSLIDYNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPQSDGKVPYLVEDRLAGETVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKSPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDPCYAKLNKVAEVGNNNNRKNAMPRLSGENKDRLDKSELRLSKSTVPSNMDLIKQLDSKAAKQGKKADTFSLVRTSQVPSLLQLKDVVLSTAVDTRRTVPRPVLTPSGVSSRSVSPFSRRPSPPRSATPIPTTTGLSFSKSITDSLKKTNELLNQEVLKLRAQVESLKQRCELQEVELQRSAKKTQEAMAVAAVESDKSKAAKEVIKSLTAQLKDLAERLPPGVYDAENNIRPAYLPNGLETNGVHYPDSNGEHHSRAESISGSSMVTLGMESSLLNRNEGNLPGIYGTNLYQQNRASVTSNGTDEHTDDRLPNGGSALQISSSNVLETVDGRNSGPLQDDESGLRSRNALMAASTNQIEAEWIEQYEPGVYITLVALKDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYEKYDVRSTDKSPGQAARRAEGAASPVSQA 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00035 1144 SMART fyve_4 643 712 IPR000306 GO:0046872
Bach1g00035 1144 SUPERFAMILY PH domain-like 37 143 - -
Bach1g00035 1144 MobiDBLite consensus disorder prediction 166 249 - -
Bach1g00035 1144 Coils Coil 902 922 - -
Bach1g00035 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 426 474 IPR000408 -
Bach1g00035 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 319 367 IPR000408 -
Bach1g00035 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 371 421 IPR000408 -
Bach1g00035 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 540 589 IPR000408 -
Bach1g00035 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 594 641 IPR000408 -
Bach1g00035 1144 Pfam Regulator of chromosome condensation (RCC1) repeat 488 535 IPR000408 -
Bach1g00035 1144 ProSiteProfiles BRX domain profile. 1064 1119 IPR013591 -
Bach1g00035 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 257 318 IPR000408 -
Bach1g00035 1144 FunFam Putative E3 ubiquitin-protein ligase HERC1 651 719 - -
Bach1g00035 1144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 658 717 IPR013083 -
Bach1g00035 1144 Coils Coil 846 887 - -
Bach1g00035 1144 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 649 711 IPR017455 -
Bach1g00035 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 593 644 IPR000408 -
Bach1g00035 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 371 425 IPR000408 -
Bach1g00035 1144 CDD FYVE_like_SF 654 707 - -
Bach1g00035 1144 PRINTS Chromosome condensation regulator RCC1 signature 371 387 IPR000408 -
Bach1g00035 1144 PRINTS Chromosome condensation regulator RCC1 signature 321 337 IPR000408 -
Bach1g00035 1144 PRINTS Chromosome condensation regulator RCC1 signature 530 548 IPR000408 -
Bach1g00035 1144 PRINTS Chromosome condensation regulator RCC1 signature 428 442 IPR000408 -
Bach1g00035 1144 PRINTS Chromosome condensation regulator RCC1 signature 412 428 IPR000408 -
Bach1g00035 1144 PRINTS Chromosome condensation regulator RCC1 signature 588 609 IPR000408 -
Bach1g00035 1144 ProSiteProfiles PH domain profile. 111 144 IPR001849 -
Bach1g00035 1144 MobiDBLite consensus disorder prediction 164 250 - -
Bach1g00035 1144 MobiDBLite consensus disorder prediction 1118 1144 - -
Bach1g00035 1144 SUPERFAMILY FYVE/PHD zinc finger 645 716 IPR011011 -
Bach1g00035 1144 Gene3D - 31 151 IPR011993 -
Bach1g00035 1144 Gene3D - 204 478 IPR009091 -
Bach1g00035 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 541 592 IPR000408 -
Bach1g00035 1144 Pfam Transcription factor BRX N-terminal domain 898 932 IPR027988 -
Bach1g00035 1144 Gene3D - 479 657 IPR009091 -
Bach1g00035 1144 Pfam Transcription factor regulating root and shoot growth via Pin3 1063 1118 IPR013591 -
Bach1g00035 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 319 370 IPR000408 -
Bach1g00035 1144 FunFam PH, RCC1 and FYVE domains-containing protein 1 228 478 - -
Bach1g00035 1144 FunFam PH, RCC1 and FYVE domains-containing protein 1 479 650 - -
Bach1g00035 1144 CDD PH_PLC_plant-like 36 144 - -
Bach1g00035 1144 MobiDBLite consensus disorder prediction 718 737 - -
Bach1g00035 1144 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 412 422 IPR000408 -
Bach1g00035 1144 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 77 918 - -
Bach1g00035 1144 MobiDBLite consensus disorder prediction 807 824 - -
Bach1g00035 1144 MobiDBLite consensus disorder prediction 1018 1035 - -
Bach1g00035 1144 SUPERFAMILY RCC1/BLIP-II 256 646 IPR009091 -
Bach1g00035 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 489 540 IPR000408 -
Bach1g00035 1144 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 464 474 IPR000408 -
Bach1g00035 1144 Pfam FYVE zinc finger 645 711 IPR000306 GO:0046872
Bach1g00035 1144 MobiDBLite consensus disorder prediction 1001 1048 - -
Bach1g00035 1144 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 426 477 IPR000408 -
Bach1g00035 1144 MobiDBLite consensus disorder prediction 803 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00035 Bach-Chr1 374639 381317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00035 1065 1135 Major Intrinsic Protein MIP AT1G31880 45.070 8.06e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00035 - - gmx:100783270 1897.48