Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00007 CAAACCCAAACCCTTTTTCTCTCTACCGTCTTTCTCTCCTCTTTGTGTTAGTGTTGTGTTCTGTTCAAACAATTATTTCTTGGGGATCGGGAGTACTTGTTCTCCGGCGAATCAGATCAGGGCCCGGAGAAGCCCAGAAAGATTCCCGACGAACCATTACCAATTAATTGTTTGAAGTTGAACTCCTTAACACTTGAGACATTACACTGTACAATGCCGTATTGAGATTGATAGAAGCAAGAATGTGATGCAGCCTGAGCCAAGAGAAGAATGAGGATGTAATGAACGTTCTGTTCGATTTATATTGAGATTTCATGGGGATTTGTTTCAGCATTGAACAGGACCAAAAACTCCACTCCACTTCAAATTATAGAGGAGATGATTCTGCTGCATCAACAACTAAGCAGGATAAAAGCACAAGCAACACTCTGTTAGCTCCCATGAATATAACAGATCTTCGCCAATGTCCTGGCTATAGTAATGTTGATATATTCACATATGAGGAGATGAGACTGGCAACAAAACACTTTCGTCCAGACTTAATTCTGGGAGAAGGTGGTTTTGGAATTGTATATAAAGGGGTGATAGATGCAAATGTGAGGCCAGGTTACAAGAGCACTCAAGTTGCCATTAAGGAGCTCAATCGAGAAGGATTTCAAGGTGATAGGGAATGGCTGGCAGAAGTTAACTATTTAGGTCAATTCAGTCACCCAAATCTTGTGAAGCTCATTGGATACTGCTGTGAGGATGAACATCGATTATTGGTCTATGAATACATGGCAAGTGGGAGCTTGGAGAAACATCTTTTTCGCAGAGTGGGCTCAACACTGACATGGTCAAAAAGAATGAAGATTGCTTTAGATGCTGCAAAAGGGCTTGCTTTTCTTCATGGTGCGGAAAGGCCAATCATATATCGTGACTTCAAGACATCAAATATCTTGCTAGATGCGGATTTCAATGCCAAGCTTTCTGACTTCGGCCTTGCAAAGGATGGGCCTATGGGGGACCAAACCCATGTCTCAACACGAGTAATGGGCACCTATGGATATGCTGCTCCTGAGTATGTGATGACTGGGCATTTGACAGCTCGAAGTGATGTGTATGGTTTTGGGGTGGTGCTACTCGAGATGCTTATTGGAAGGAGGGCATTGGACAAGAGCAGACCGAGCCGAGAACACAACTTGGTTGAGTGGGCACGCCCACTATTGAACCATAATAAGAAACTCCTGAGAATTTTGGATCCTAGAATGGAAGGCCAATATTCAACTAGAACTGCAATAAAGGTGGCTCATTTAGCATACCAATGCCTTAGTCAAAACCCAAAAGGCAGGCCACTCATGAGCCAGGTTGTTGAAATCCTTGAAAATTATCAATCGAAGGGAGAAAATGAGGAAGGGCAAATGCATGAAAGTGGTGGTGTAACTATTTATGAGGTTCCAAAGGGCACCACCGGCACTGGTACTCTTACGAAGGGTAAAAGTCAATCAGAGAGATAGAAAAGCAGAAGTGAAACTTCACATTATTATAATTCATGTAGTCCTTCACCAGATTCTGTGGCACCTGAGAAATCAGCTTCTTCCAGAAGCCCAATTTGTACCTATCCTGATGTAAGTTGAAACTTTTATGAAATGTCAACAGGTCAAAACAGTTTGTGTTTTGGGATGGTGTCATTTGTAGCAGAATTTGGCGAAGGCAATTATATAGGTCAA 1709 0.4242 MGICFSIEQDQKLHSTSNYRGDDSAASTTKQDKSTSNTLLAPMNITDLRQCPGYSNVDIFTYEEMRLATKHFRPDLILGEGGFGIVYKGVIDANVRPGYKSTQVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALDAAKGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLEMLIGRRALDKSRPSREHNLVEWARPLLNHNKKLLRILDPRMEGQYSTRTAIKVAHLAYQCLSQNPKGRPLMSQVVEILENYQSKGENEEGQMHESGGVTIYEVPKGTTGTGTLTKGKSQSER 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00007 393 SUPERFAMILY Protein kinase-like (PK-like) 52 350 IPR011009 -
Bach1g00007 393 PANTHER OS01G0588500 PROTEIN-RELATED 32 353 - -
Bach1g00007 393 MobiDBLite consensus disorder prediction 356 393 - -
Bach1g00007 393 MobiDBLite consensus disorder prediction 376 393 - -
Bach1g00007 393 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Bach1g00007 393 FunFam Probable serine/threonine-protein kinase PBL8 155 367 - -
Bach1g00007 393 ProSitePatterns Protein kinases ATP-binding region signature. 78 107 IPR017441 GO:0005524
Bach1g00007 393 ProSiteProfiles Protein kinase domain profile. 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00007 393 FunFam Serine/threonine-protein kinase BIK1 41 154 - -
Bach1g00007 393 Pfam Protein tyrosine and serine/threonine kinase 77 349 IPR001245 GO:0004672|GO:0006468
Bach1g00007 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Bach1g00007 393 CDD STKc_IRAK 78 351 - -
Bach1g00007 393 Gene3D Transferase(Phosphotransferase) domain 1 155 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00007 Bach-Chr1 108638 113299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00007 60 349 Glycoside Hydrolase AT3G07070 50.853 5.00e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bach1g00007 PK_Tyr_Ser-Thr 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00007 - - qsa:O6P43_003871 658.292