Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g01103 ATGGCGATTTCCCCTCAAGGTTTTCCGCCTAGAAAACGCCGGCAATCGGCGACGTCGTTTGTCTCTACCAGATTCACAGAGCTCAACCTCCTTCAATCTCTTCTCCAACTAACCCATGAAATTTCATCTCTCATACCCATCGATTTCCTCCTTAAACGCAGTTCCTCTTCTATCATTCGCAAAATCAAGCTTTTGAATATTTTATTCGAAGAGCTAATTCGCAGTTCGAACCCAGTTTTTTCTCAGTCCTCCTTGCTCTGTTTCGAAGAAATGTACATGGTGTTACAGAGAATCAAAACTCGTATTGAAGATTGCTCCAGGGGAAGCGGCAAGATGTGGCTGCTGATGCAAAGCGATAAGGTTGTTGACAGTTTCCATAAACTCACCGCAGATTTGTCGACGGTTCTAGATATCTTGCCCCTCAAAGAACTCGACCTAAACGACGACGTTCAAGAACTCGTGTTGCTCATCAGAAAACAATGCTCTGACTCCAAACCTCTCGCGGATCCCAGAGATAGCGAGCTTAGGCGCGAGGTGATAACCATGCTTGATCGGATTAAGAAAGAGATTGTTCCAGAACCTTCTAAGCTCTCGGAGATTTTCGATGGTTTAGAAATTCGAGATTCTTCCAGTTGCAGAGCAGAAATCGAGAGCTTGGAAGAGGAAATTCAGAACAGGAACGACGAGCAATCCAAATCGGAGATTGTCGCTTTGATCGGACTCGTCCGATACACCAAATGCGTTCTTTTCGGAGAATCCACGGCGCTACCGAGCACCGAGATCCACCAGCGGAAACAACCGTCGGAGGTTGTTATTCCAGCTGATTTCAGGTGTCCGATAACTCTAGAGATCATGCGGGACCCAGTCGTCGTGGCAACAGGTCAGACATACGATCGGGAGTCAATTAAAATGTGGATTGAATCTGGTCATAACACGTGTCCCAAGACAGGTCAGACCCTGGCCCACGCGGACCTCATCCCTAATTGCGCGTTGAAGAGTCTAATAGCCATGTGGTGCCGGGAGCAGAAAATCCCACTTGAAACAGCGAGTGGGAACGAGAAAGTTAGCGGCGTTGTAACGAACAAGGCAGCGTTGGAAGCTACAAGAATGACGGCGTCGTTTCTGGTCAACAAGTTGTCTGTTTCACCGACGTTGGAGGCTGCAAACGGTGTTGTATATGAGCTGCGGGGACTGGCAAAAACGGACTGCGTTAGCCGAGCATGCATAGCTGAAGCCGGAGCTATCCCTGCTCTAGTTCGGTATCTCAGCTCTGACATTGGCTCACAGAGCCCGAATCTCCAGGTTAACGCCGTCACCACGATTCTCAACCTCTCCATTCTCGAAGCGAACAAAACGAGGATAATGGACACTGACGGAGCATTAAACGGCGTCATCGAGGTGCTGCGTTCTGGGGCCACGTGGGAAGCCAAGGGGAACGCGGCGGCTACTATATTCAGCTTATCAGGTGTGCAGTCGTATAGGAAAAGGATGGGGAGAAAGACACGTGTCATAAAAGGGTTGATCGACTTGGCAAAAAGTGGGCCCGCAAGTGCCAAGAGGGACGCATTGGTGGCTATTTTGGCCCTGGCGGGTGATAGAGAAACGGTAGCGAGGTTGGTTGAAGGTGGGGCGGTGGAGATGACGGTGGAAGGGATGGACAGTTCACCAGAGGAGTCGGTGACCATCCTCGAGGCGTTGGTAAAGAGAGGTGGATTGCTGGCCGTTGCCGCCGCCTACGGCAGCATCAAGAAATTGGGTGTCATATTAAGGGAAGGCTCAGATAGAGGGAGAGAAAGCGCAGCGGCTACTCTTGTTACAATGTGCCGGAAAGGGGGATCAGATATAGTAGTAGGGTTGGCGTCGATTATGGGGATTGAAAGAATCGTATGGGAATTAATGGCAACTGGAACAGTGAGAGGGAGAAGAAAAGCAGCCACCTTGTTGCGAATTCTCCGGCGATGGGCGGCGGGTTTAGATGGTGGGATAGCGGAAGGGATGACAACTACTATGAGTATGAGTTCGGCCACAACTATGCTTCCAGCTCAATAA 2049 0.4998 MAISPQGFPPRKRRQSATSFVSTRFTELNLLQSLLQLTHEISSLIPIDFLLKRSSSSIIRKIKLLNILFEELIRSSNPVFSQSSLLCFEEMYMVLQRIKTRIEDCSRGSGKMWLLMQSDKVVDSFHKLTADLSTVLDILPLKELDLNDDVQELVLLIRKQCSDSKPLADPRDSELRREVITMLDRIKKEIVPEPSKLSEIFDGLEIRDSSSCRAEIESLEEEIQNRNDEQSKSEIVALIGLVRYTKCVLFGESTALPSTEIHQRKQPSEVVIPADFRCPITLEIMRDPVVVATGQTYDRESIKMWIESGHNTCPKTGQTLAHADLIPNCALKSLIAMWCREQKIPLETASGNEKVSGVVTNKAALEATRMTASFLVNKLSVSPTLEAANGVVYELRGLAKTDCVSRACIAEAGAIPALVRYLSSDIGSQSPNLQVNAVTTILNLSILEANKTRIMDTDGALNGVIEVLRSGATWEAKGNAAATIFSLSGVQSYRKRMGRKTRVIKGLIDLAKSGPASAKRDALVAILALAGDRETVARLVEGGAVEMTVEGMDSSPEESVTILEALVKRGGLLAVAAAYGSIKKLGVILREGSDRGRESAAATLVTMCRKGGSDIVVGLASIMGIERIVWELMATGTVRGRRKAATLLRILRRWAAGLDGGIAEGMTTTMSMSSATTMLPAQ 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g01103 682 PANTHER U BOX DOMAIN-CONTAINING 52 652 - -
Bach14g01103 682 Coils Coil 209 236 - -
Bach14g01103 682 Pfam U-box domain 272 343 IPR003613 GO:0004842|GO:0016567
Bach14g01103 682 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 350 IPR013083 -
Bach14g01103 682 SUPERFAMILY RING/U-box 269 344 - -
Bach14g01103 682 SMART Ubox_2 275 338 IPR003613 GO:0004842|GO:0016567
Bach14g01103 682 Pfam Armadillo/beta-catenin-like repeat 406 445 IPR000225 GO:0005515
Bach14g01103 682 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 413 459 IPR000225 GO:0005515
Bach14g01103 682 FunFam RING-type E3 ubiquitin transferase 358 546 - -
Bach14g01103 682 FunFam RING-type E3 ubiquitin transferase 267 345 - -
Bach14g01103 682 Gene3D - 356 576 IPR011989 -
Bach14g01103 682 ProSiteProfiles U-box domain profile. 271 345 IPR003613 GO:0004842|GO:0016567
Bach14g01103 682 CDD RING-Ubox_PUB 273 325 IPR045210 -
Bach14g01103 682 SUPERFAMILY ARM repeat 375 651 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g01103 Bach-Chr14 11731744 11733792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g01103 9 657 U-box Gene Family AT5G01830 59.542 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g01103 - - qsa:O6P43_026334 934.095