Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00970 ATGGCTGGAAATCCCTCTCCCCAGCCTTTTGTCAATGCCCACATGCGTCAGTTTGGATTTCAAAGCATAGAAGCAGCAGGATCAAAGCCTTTGGCTGACGAGTCACCAGTCACCCTTTTAATTAGGCACCTTCCAGAATCTATTCCTCATGACACCCTTTCTCGACTCTTATCCCATTTTGGTGCTTCCTCAGTTCGTCCCTGCTCAAGTGGAAGATTGAGAAATTGTGCTTTTGCTGATTTCAAAAACGACATGCTGGCATCTCAAGCACAATGTCAACTAAATGGGTTGAGATTTCTTGGTAAAGTCTTGTCTGTGGAGAGAGCTAGTAACCCAAATGAGAACGGTGAAAAAAACTCTGGAGCTCAACTAGGAAAGGATTCCAAATCATCTGTTGTAAAGAATGCAAATTTGTCCAAAGCTCTTGATGAAGGTTCTAAATCAGGAGCCCTTCCTTCTCCTGAACCAATTGCTGCAAGACTTGGTGTGGACTATCCATTTCCTCCTCACCTAGAGTATGCTTACCCTCCACCAGATGGAAATATTCTAACCAACATTGTAAATGCTCTAATTGCTGTTCCCCGCTTTTACACACAGGTTGTGCTACACCTTATGAACAAAATGAACATTCCAGCTCCATTTCGTATGGCACTTCCTACTCCACCCCTACCGCCACAGGTACCAGTGGCACCACCCCAGCCGCCGCCACCACCACCTCCACCCCCACCTCCACGCTCATCTGATTCTATGAAGCGTAAGTCTGCAGATCTATCCAGTGATGAATCAGAGATGGAGTCTTCAGATGAGGAGGTTGATGGGAATTCAAATTCTATGGGTGTGGCAAGAAAAGCAAAGTACAGAACAAACCGTGTGAGGCGTGAAACCATTGTTGGTCCTGCCATTGATAAAAATGTAGCTCATGAGGCTGTTGGAGTAAAACCAGCAAATTTGGTTCCAAAAGAAATTCCGATGATAAAAAAGAAGAACCCTGTCTTACAGATTAAGATAACTCCTAAAGCAATCCAGAATGAAGATAAAGATGGCAACACAACAGAAGAGTTGGTGGAGCCAGAAAAGGTGATTCAAGATCCTAAAAAATTTTTGACTTCAGAAGAATTAGAGAGTGGAAAGTTGCCACCAGAGGAAATTTTATCTCTTCCAATGTTCAAGAACTATACGGCTGGAAATCCTGCTCCTGTGTTATATATTAAGAATTTGGCCAAAGACGTGATTGTTGATGATTTCTATTTTATTTTTGGTTCCTTGTTTGGAAGTGTTGAAGCTGCTAAGTCTGGTCTTCATGTCAAGCTGATGCAGGAGGGAAGGATGAGGGGTCAAGCTTTTTTGACATTCCCATCAATTGAACTGGCTCATCAAGCTTTGAATCTGGTGAATGGGTATGCATTCAAAGGCAAGCCCATGATCATCCAGTTTGGTCGTAATCCTGCTGCTGCCAAAGGAACTTAA 1467 0.4335 MAGNPSPQPFVNAHMRQFGFQSIEAAGSKPLADESPVTLLIRHLPESIPHDTLSRLLSHFGASSVRPCSSGRLRNCAFADFKNDMLASQAQCQLNGLRFLGKVLSVERASNPNENGEKNSGAQLGKDSKSSVVKNANLSKALDEGSKSGALPSPEPIAARLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVVLHLMNKMNIPAPFRMALPTPPLPPQVPVAPPQPPPPPPPPPPPRSSDSMKRKSADLSSDESEMESSDEEVDGNSNSMGVARKAKYRTNRVRRETIVGPAIDKNVAHEAVGVKPANLVPKEIPMIKKKNPVLQIKITPKAIQNEDKDGNTTEELVEPEKVIQDPKKFLTSEELESGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAKDVIVDDFYFIFGSLFGSVEAAKSGLHVKLMQEGRMRGQAFLTFPSIELAHQALNLVNGYAFKGKPMIIQFGRNPAAAKGT 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00970 488 CDD RRM1_RBM40_like 38 109 IPR034147 GO:0005515
Bach14g00970 488 PANTHER UNCHARACTERIZED 33 484 IPR045164 -
Bach14g00970 488 MobiDBLite consensus disorder prediction 223 247 - -
Bach14g00970 488 FunFam U11/U12 small nuclear ribonucleoprotein 65 kDa protein 394 488 - -
Bach14g00970 488 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 104 IPR000504 GO:0003723
Bach14g00970 488 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 401 473 IPR000504 GO:0003723
Bach14g00970 488 MobiDBLite consensus disorder prediction 110 131 - -
Bach14g00970 488 Gene3D - 394 487 IPR012677 -
Bach14g00970 488 SUPERFAMILY RNA-binding domain, RBD 34 481 IPR035979 GO:0003676
Bach14g00970 488 SMART rrm1_1 400 477 IPR000504 GO:0003723
Bach14g00970 488 SMART rrm1_1 38 107 IPR000504 GO:0003723
Bach14g00970 488 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 399 481 IPR000504 GO:0003723
Bach14g00970 488 MobiDBLite consensus disorder prediction 223 286 - -
Bach14g00970 488 Gene3D - 12 127 IPR012677 -
Bach14g00970 488 SUPERFAMILY Formin homology 2 domain (FH2 domain) 234 244 - -
Bach14g00970 488 CDD RRM2_RBM40_like 400 479 - -
Bach14g00970 488 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 111 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00970 401 477 Eukaryotic Initiation Factors Gene Family AT3G16380 32.468 3.83e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00970 K13157 - gmx:100814307 630.557