Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00949 ATGGGGCCAAATGCAGGTTTGTCTGCGGTGGCAAAAGAAGCCGAGAAACTCAAAATAGATGGCAACAATTACTTCAAAAAAGATCGTTTTGGAGCTGCAATTGATGCTTACACGGGGGCAATTACACTGTGCCCGAATGTTCCTGTTTATTGGACAAATCGTGCTCTCTGCCATCGCAAACGCAATGACTGGGTAAGAGTAGAAGAAGACTGTTGCAGAGCAATTCAGCTTGACAACAAATCAGTCAAGGCCCACTATATGTTGGGGCTTGCACTGCTACAGAGACAAGAATATACCACCGGAATCATTGAACTAGAGAAGGCTTTGGATCTTGGGAGGGGTGCTAATCCTAATGGCTATATGATAGAGGAGATCTGGCAGGAACTTGCAAAAGCAAAATACAAAGAGTGGGAAAGGGCATCTACCATCCGAGCATGGGAATCGCAAAGCTTGAAAGAAACTTGTGAGGCTGCTTTGAAGGAAAAACATGTGCTTGATGTCTCCCAAATGGAAGGATTTGTGGATGAAGCTACTACATCACACACGGAACAACTAGAGGCTCTAGGAAGTGTGTTCGAGAAAGCTTCAGAGGCTGATACTCCAACGGAGGTGCCAGATTACCTATGCTGTAGAATCACACTTGATATTTATCGCGATCCTGTCATTGCTCCAAGTGGACATACATATGAGAGGGCAGTGATTCTTGATCATCTTGAGAAGGTGGGTAGGTTTGATCCAGTCACGCGGGAACACCTTTATCCATCACAACTAGTACCAAACTTAGCAATCAAGGAAGCAGTCCAAGCATTTTTGGATAAACATGGGTGGGCATACAAGATGTATTAACATTTGATTTAATTTGAAATTATCAGTTTGATGTAGTTTTGTGTGATGGATAATGCAGTGCAACTTTATTGTTTAGCATAGTTCTCTTTTTTGGTCATTCACAGTGCCCAGCTTTTGAACATCTGAGTCAATTGAAGTGTATATAGAGTTAAAAACTTATTTTACATGTTGCTGTACATGGTTGTGCACTCCAGGGAACAGTTCCCTCTACCTTTTGACTAATGAAAATGGCCATCAACTCCA 1089 0.4242 MGPNAGLSAVAKEAEKLKIDGNNYFKKDRFGAAIDAYTGAITLCPNVPVYWTNRALCHRKRNDWVRVEEDCCRAIQLDNKSVKAHYMLGLALLQRQEYTTGIIELEKALDLGRGANPNGYMIEEIWQELAKAKYKEWERASTIRAWESQSLKETCEAALKEKHVLDVSQMEGFVDEATTSHTEQLEALGSVFEKASEADTPTEVPDYLCCRITLDIYRDPVIAPSGHTYERAVILDHLEKVGRFDPVTREHLYPSQLVPNLAIKEAVQAFLDKHGWAYKMY 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00949 281 Gene3D Tetratricopeptide repeat domain 8 164 IPR011990 GO:0005515
Bach14g00949 281 Pfam U-box domain 204 276 IPR003613 GO:0004842|GO:0016567
Bach14g00949 281 SUPERFAMILY TPR-like 11 135 IPR011990 GO:0005515
Bach14g00949 281 CDD RING-Ubox_CHIP 204 274 IPR045202 -
Bach14g00949 281 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CHIP 8 279 IPR045200 GO:0000209|GO:0061630
Bach14g00949 281 SMART tpr_5 14 47 IPR019734 GO:0005515
Bach14g00949 281 SMART tpr_5 82 115 IPR019734 GO:0005515
Bach14g00949 281 SMART tpr_5 48 81 IPR019734 GO:0005515
Bach14g00949 281 ProSiteProfiles U-box domain profile. 203 277 IPR003613 GO:0004842|GO:0016567
Bach14g00949 281 SMART Ubox_2 207 270 IPR003613 GO:0004842|GO:0016567
Bach14g00949 281 SUPERFAMILY RING/U-box 195 278 - -
Bach14g00949 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 202 280 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00949 Bach-Chr14 8659566 8662926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00949 14 280 U-box Gene Family AT3G07370 70.412 2.10e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00949 K09561 - gmx:100796519 461.455