Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00948 ATGGCAAAGCAGGAGATGGTGGATTCTAATATGCCGACGGCGGCGGCGGCGGCGACGAAGAAGATAGAGTTGAAGAAGGAATTGCAGAGATTGGTAAAGTCTATTGTTGATGATGAGGATTACAGCACTGAAGCCATTGATCAAGCTAAGGAAACTTTGTCTATGCTAAAGGAGTTGAAGCTGAGACGGACATCATCATCAATGTCGTTGAAGCTTCACAAAACTATGACTTGCCCAGAAGAATTCAAGTGCCCTCTTTCTAAAGAATTGATGAAAGATCCTGTCATTGTGGCTTCTGGACAGACATACGATAGACCCTTCATTCAACAATGGCTGAAAGCAGGAAATAGGACTTGCCCTCGTACCCAAGAAGTCCTCTCACACACTTTGCTCACTCCAAATCACCTAGTTTCCAAAATTATACAACAATGGTGCAAAAACCAGGGGATTGAATTTTCCAGTTCCAATTCTGTTCACTGCATTGATGAGGAAGGGATAATGGACGCTGACCGCGATCATTTTCTTTGGTTGCTTGAGAAAATTTCTTCAGATTCTTCAGCTCTTTATGAACAGAAAGCTTATGCAAAGGAGCTCCGGCTGTTGACGAAGAAAATGCCTGCTTTCAGGGCAGTTTTTAGTGAATACCCAGATGTCATTCCTCAATTGCTTAAACCAATCTCAAGAAATGATTCTTTCACTAATAGTCACCATGATCTCCAAGAAGATGTGATTACAACACTGCTGAATATCTCAATCCATGACAATAACAAGAAACTGGTTGCTGAAACTGAAATGGTGATTCCAATCCTTATCAAGGCATTGAGAACAGGAACAATAGCAACAAGAAGCAATGCAGCAGCAGCACTTTTCACCTTATCAGCTCTTGACTCAAACAAAGAGCTTATAGGCAAATCAGGTGCCCTGAAGCCACTAATTGACCTCGTAGAAGAAGGGCATCCATTGGCAATGAAAGATGTTGCTTCTGCAATTTTCATCCTTTGTGTCCTCCATGAGAACAAGGCAAGAGCTGTGAACGATGGTGCAGCGAGGGTGGTTCTAAGCAAGATAATGAACCGGATTAATGTCGATGAATTGCTCACCATTCTCGCATTGCTTTCGAGTAACCAGAAGGCTGTTCAAGAAATGGGAGAGCTCGGAGCAGTTCCTTGCTTGCTAAGCATTATCAGAGAAAGCAGCTGCGAACGCAGCAAGGAGAATTGCATAGCAATTCTGCAAACTATCTTTTTGTATGATAGATCCAAGTTGAAGGAAATAAAGGAAGAAGAAAGCAGTTACAGAACCATATCTCAACTTGCAGAGAATGGAACTTCAAGGGCTAAAAGGAAAGCTAATGCAATTATTGAGAGACTGAACAGGGTTGTTAATATCACACATACTGCTTAA 1404 0.4202 MAKQEMVDSNMPTAAAAATKKIELKKELQRLVKSIVDDEDYSTEAIDQAKETLSMLKELKLRRTSSSMSLKLHKTMTCPEEFKCPLSKELMKDPVIVASGQTYDRPFIQQWLKAGNRTCPRTQEVLSHTLLTPNHLVSKIIQQWCKNQGIEFSSSNSVHCIDEEGIMDADRDHFLWLLEKISSDSSALYEQKAYAKELRLLTKKMPAFRAVFSEYPDVIPQLLKPISRNDSFTNSHHDLQEDVITTLLNISIHDNNKKLVAETEMVIPILIKALRTGTIATRSNAAAALFTLSALDSNKELIGKSGALKPLIDLVEEGHPLAMKDVASAIFILCVLHENKARAVNDGAARVVLSKIMNRINVDELLTILALLSSNQKAVQEMGELGAVPCLLSIIRESSCERSKENCIAILQTIFLYDRSKLKEIKEEESSYRTISQLAENGTSRAKRKANAIIERLNRVVNITHTA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00948 467 ProSiteProfiles U-box domain profile. 77 151 IPR003613 GO:0004842|GO:0016567
Bach14g00948 467 PANTHER U BOX DOMAIN-CONTAINING 14 457 - -
Bach14g00948 467 FunFam RING-type E3 ubiquitin transferase 362 463 - -
Bach14g00948 467 Pfam U-box domain 79 148 IPR003613 GO:0004842|GO:0016567
Bach14g00948 467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 151 IPR013083 -
Bach14g00948 467 CDD RING-Ubox_PUB 79 131 IPR045210 -
Bach14g00948 467 FunFam RING-type E3 ubiquitin transferase 77 151 - -
Bach14g00948 467 SUPERFAMILY RING/U-box 77 151 - -
Bach14g00948 467 Gene3D - 158 460 IPR011989 -
Bach14g00948 467 SMART arm_5 253 294 IPR000225 GO:0005515
Bach14g00948 467 SMART arm_5 375 416 IPR000225 GO:0005515
Bach14g00948 467 SMART arm_5 295 335 IPR000225 GO:0005515
Bach14g00948 467 SMART Ubox_2 81 144 IPR003613 GO:0004842|GO:0016567
Bach14g00948 467 SUPERFAMILY ARM repeat 174 457 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00948 Bach-Chr14 8656155 8658782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00948 140 467 U-box Gene Family AT3G07360 59.697 5.68e-127 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00948 - - pcin:129287872 641.728