LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach14g00898	ATGTTGATACTGTACCCACTATTACTCTATACACTCACGTCCGCACAACAAACAAGCTGGGTTGAGTCGAAGTGTGGAGATGTTGTCATCCCTTTTCCCTTTTACCTGAATTCAAGCTATCATTGCTCAGAAGATCATCCCTGTTCTCAGTTGGATGACTGGTTTGAAATAGAATGCAGGGATAATCAAACACCGTTTCTCAAATACGAAAGTCTGGAGGTGAAAGAAATTGATATTGAAAACAATACAATCACTGTGATGAATCCAATTGACCGTTGTCTAACAAATGTCTCACTTAAAGCTCAGAAAGTCGTGTGTGTGTCTGTTCTCGAGAGCAAGTATTGCTGCCAGACCAGGTTCCCCTTGTTTTTATCAGAATTGAACATATCAACTGTTCGTGTGAAGGCAAGAGATACCAATCAACCATGTGACTCTCTGCTGATGGTAGACTCAGACTGGCTTTCCAAGTCAGAACTTAACAATTTTAGCCTTGTGTTCGAGCGTATTAAGGGTTTGTCTTCAGTTCCTGCAGTGCTTGAATGGGGGATTCCATTCATTTCCGCTTCCATTTCAGTACTTCCGAATGTCAAGGACTGCCATGATTATACTGTTTATACCTCACAAGGTATTGGGCTCTTCAGAAGATTATGTAAGTGCCCACTTGGTTTCAAGGGAAATCCATACGCCGGTGGAGGATGTATAGGAGATGATAGTGGCAAGAGAAAGAGACAGGCACTTTCCCGGATCATAACAGGACAAAAAGCAGTTTCTTCAATGGGACCGGATGGATATGCTAGAGGTTTGGCTTCTTATTTCACTACATGTATGGATGAGAATTGTATATTTAATATACTTGATGAAAATGTGTTGAAGGAGGGACACAGAGAACATATCATGGTGATTGCCAACCTTGCCAAAAGATGCTTAAGCATGAATGGGAAGGATCGACCTACAATGAAAGAAGTTACAGTTGAGTTAGTAGGGATACAGACTTTGAGAAATGAGAGTAAGGATAGACTTGATGGCAGTGGAATTAATCTTGTCGAATCTGACACTTATTCTCCTTGGGACATATTGAAACATTCTGCTTCAGTAAACCTACCTCTTTCAAACAGCATGACTTCTTCATCATCAAATGTTCTGTCTTTGCTGTACTCCACGACTTGGAGAAGGCCACCGATCCCTTTAATTGGGATAGTCCTCGGAAAAGGAGGACAAGGTACAGTTTACAAAGGAATGCTTGCCAATCGTAAAATTGTTGCAGTGAAGAAGCTGATGGTCCAAGGAAATGTAGAAGACTTTATTGATGAGGTTGTTATTCTTGCTCAAATAAATCACAAAAATGTGGTCAATTTATTAGGATTTTGTTAA	1371	0.4048	MLILYPLLLYTLTSAQQTSWVESKCGDVVIPFPFYLNSSYHCSEDHPCSQLDDWFEIECRDNQTPFLKYESLEVKEIDIENNTITVMNPIDRCLTNVSLKAQKVVCVSVLESKYCCQTRFPLFLSELNISTVRVKARDTNQPCDSLLMVDSDWLSKSELNNFSLVFERIKGLSSVPAVLEWGIPFISASISVLPNVKDCHDYTVYTSQGIGLFRRLCKCPLGFKGNPYAGGGCIGDDSGKRKRQALSRIITGQKAVSSMGPDGYARGLASYFTTCMDENCIFNILDENVLKEGHREHIMVIANLAKRCLSMNGKDRPTMKEVTVELVGIQTLRNESKDRLDGSGINLVESDTYSPWDILKHSASVNLPLSNSMTSSSSNVLSLLYSTTWRRPPIPLIGIVLGKGGQGTVYKGMLANRKIVAVKKLMVQGNVEDFIDEVVILAQINHKNVVNLLGFC	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach14g00898	456	PANTHER	WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21	400	456	IPR045274	GO:0007166
	Bach14g00898	456	Pfam	Protein tyrosine and serine/threonine kinase	400	456	IPR001245	GO:0004672\|GO:0006468
	Bach14g00898	456	Pfam	Wall-associated receptor kinase galacturonan-binding	23	87	IPR025287	GO:0030247
	Bach14g00898	456	ProSiteProfiles	Protein kinase domain profile.	395	456	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach14g00898	456	SUPERFAMILY	Protein kinase-like (PK-like)	396	456	IPR011009	-
	Bach14g00898	456	Gene3D	Phosphorylase Kinase; domain 1	350	456	-	-
	Bach14g00898	456	Gene3D	Transferase(Phosphotransferase) domain 1	245	348	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach14g00898	Bach-Chr14	8173468	8178233	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach14g00898	400	456	Receptor kinase-like Gene Family	AT1G16110	66.102	8.30e-17	81.3

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK	Bach14g00898		GUB_WAK_bind	3.7e-12	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach14g00898	-		-	shis:125210067	143.28