Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00874 ATGGTTTCAGGCTCTGGCATTTGCGCAAAGAGGGTGGTGGTGGACGCCCGCCACCACATGCTTGGTCGTCTTGCTTCGATCGTGGCCAAGGAGCTTCTTAATGGCCAGAAGGTGGTCGTTGTGAGGTGCGAGGAGATTTGCATCTCCGGTGGTTTGGTGAGGCAAAAGATGAAGTACATGAGGTTCCTTCGCAAAAGGATGAACACCAAGCCTTCCCATGGTCCTATTCACTTCCGAGCTCCGGGGAAGATCTTCTGGCGAACTGTTCGTGGGATGATTCCGCACAAGACAAAGCGTGGGGCAGCTGCACTTGATCGACTCAAGGTTTTTGAGGGCATTCCTCCTCCATATGACAAAATGAAGAGGATGGTTGTCCCTGATGCTTTGAAGGTGTTGAGGCTGCAGAAGGGTCACAAGTTCTGTCTGCTGGGTAGATTGTCATCAGAGGTCGGATGGAACTACTATGATACCATCAGGGAGCTGGAAAAGAAGAGAAAGGAGAGAGCTCAAGTTTCTTACGAGAGGAAGAAGCAGCTCGGCAAACTAAGGGTGAAGGCGGAGAAGATTGCTGAAGAAAAGCTCGGTTCCCAACTTGACATCCTTGCTCCGGTTAAATATTGA 621 0.5056 MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPGKIFWRTVRGMIPHKTKRGAAALDRLKVFEGIPPPYDKMKRMVVPDALKVLRLQKGHKFCLLGRLSSEVGWNYYDTIRELEKKRKERAQVSYERKKQLGKLRVKAEKIAEEKLGSQLDILAPVKY 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00874 206 Gene3D Ribosomal protein L13 8 154 IPR036899 GO:0003735|GO:0005840|GO:0006412
Bach14g00874 206 Gene3D - 156 206 - -
Bach14g00874 206 PANTHER RIBOSOMAL PROTEIN L13 1 187 IPR005822 GO:0003735|GO:0005840|GO:0006412
Bach14g00874 206 FunFam 60S ribosomal protein L13a-4 8 154 - -
Bach14g00874 206 NCBIfam 50S ribosomal protein L13 12 154 IPR005755 GO:0003735|GO:0006412|GO:0015934
Bach14g00874 206 Hamap 50S ribosomal protein L13 [rplM]. 11 135 IPR005822 GO:0003735|GO:0005840|GO:0006412
Bach14g00874 206 FunFam 60S ribosomal protein L13a 155 206 - -
Bach14g00874 206 SUPERFAMILY Ribosomal protein L13 12 154 IPR036899 GO:0003735|GO:0005840|GO:0006412
Bach14g00874 206 CDD Ribosomal_L13 12 113 IPR005822 GO:0003735|GO:0005840|GO:0006412
Bach14g00874 206 Pfam Ribosomal protein L13 10 115 IPR005822 GO:0003735|GO:0005840|GO:0006412
Bach14g00874 206 ProSitePatterns Ribosomal protein L13 signature. 89 112 IPR023563 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00874 Bach-Chr14 7939806 7941088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00874 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 89.806 4.35e-140 388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach14g00874 14 7939806 7941088 Bach14g00874 14 7939806 7941088 ECH