Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00864 ATGACGTCGAGTATGGCGCAGAGTAACTGGGAAGCTGATAAAATGCTTGATGTTTATATTCATGATTATTTGTTGAAAAGAAAACTACACGCCTCTGCGAAAGCCTTTATGACCGAGGGGAAAGTTGCCACTGATCCAGTGGCAATTGATGCTCCTGGAGGATTTCTTTTTGAGTGGTGGTCTGTCTTTTGGGACATATTCATTGCAAGGACAAATGAGAAACATTCTGAACCTGCTGCAGCTTACATTGAGAACCAGCAAATGAAGGCCAGAGAACAACAACTTCAGATGCAGCAATTGCAACTCATGCAGCAGCGCAATGCACAGTTACAACGAAGAGATCCTAGTCATCCTGCTCTTGGTGGTTCCTTAAATGCCATAAACTCTGAAGGAATGTTGGGTCAGCCACCAGCCAGTGTGTTGGCCTTGAAAATGTATGAAGAACGAATGAAACACCCTCAACCAATGGACTCAGGCGCATCTCCAGCACTTCTTGATGCCAACAGGATAGCCCTTCTCAAATCAGCCAGCGGTCATCAGGGCCAGTTGGTACAAGGTAATTCAGGAAATATGTCCACTGCATTGCAGCAAATTCAGGCACGGAGTCCCCTTACCTCTGATATTAAACCAGAAGTTAACTTAGGTGCCACTACAAAGAGTATGCCTATGGATACATCAGTGTATCGACAAGCAATTTTGCAGTCAAAATCTGGGTTAGGCAGTGCAGGATTAAATCAAGGAGTTACAGGTCTTCCGCTCAAGGGTTGGCCTCTGACTGGGATTGATCAACTACGGCCTAATTTAGGCGTTCAGGTTCCGAAACCTAATTTGACAACCCAAAACCAATTTCTTTTGGCGTCACAACAGCAGGTCTTAGCACAGGCTCAGGCACAAAATAACCTTGGAAATTCTGCTAGTTATGGTGATATGGATCCCCGTAGACTTAGTTCTCTGCCTCGAGGTAACTTGAATGCAAAGGATGGACAGTCCACCAGGAATGAAGGATCTATGTGCTCCCAAGTGCAATCTGGTTCCCCTAAGATGAAGATGGCCCAGATGCAACACTCTTCATCTCAACAAGAGCAATTGCAACAGCAACTACATCAGAATAACAGAAAAAGGAAACAACATTCTTCTTCTGGGGCTGCCAATAGCACTGGTACTGGAAACACGGTGGGTCCTTCGCCCAATTCACCACCTTCAACACACACACCTGGTGATGGAATGAATACAGCAAGCAGCATGCAGCACGTTAACAGTGTGTCAAAGAGCTTGATGATGTATGGTACAGAAGGGACAGGAGGCCTTGCTTCTTCTTCAAATCTTCTGCAGGATGACATGGAACGATTTGGAGATGTTGGTACCTTAGAAGATAATGTAGAATCCTTTTTATCAAATGATGGAGATGGTGGTGGTAATCTCTATGGAACAGTAAAACCAAGTCCGGCTGAGCACCAGAAAGAGTCTTCAAAAGGTTTCACCTTTGCTGAATTCGGTTGCATAAGAACAAGGAACAACAGCCAAGTTACTTGCTGCCATTTCTCTTCAGATGGAAAGTTGCTTGCTAGTGCTGGACATGACAAGAAGGTTGTCCTCTGGAACATGGACACTTTGCAGACAGAAAACACTCCTGAAGAACACAAATCAGTCATTACAGATGTGCGTTTTAGACCAAATTCGTCTCAGTTGGCAACAGCCTCAGTTGATAAAACTGTGCGACTATGGGATGCTGCCAATCCAACCTATTGTCTGCAAGAATATAGTGGGCGCAATTCACCTGTTATGTCTCTCGATTTCCACCCGCAGAAAACTGACCTTTTCTGTTTCTGTGATGGTGACAATGAAATTCGCTATTGGAATATTAACTCATCCTCCTGCACCCGTGTATCTAAGGGAGGTACTGCACAAGTGAGGTTTCAGCCAAGACTGGGACGTCGATTGGCTGCTGCATCTGATAAAGTAGTGACAATATTTGATGTTGAGACTTACACTCAAATATTCTCATTACAGGGTCATTCTGAAATGGTGAACTATATTTGCTGGGATGCAAATGGAGATTTCCTGGCATCTGTGAGTCGGAACTGGATAAAAATTTGGTCACTTGCCTCAGGAGAATGCCTTCAGGAGCTCAACTCTAGCGAGAACCAGTTTCATTCATGTGTTTTTCATCCAAGTTATTCTACTTTGTTGGTGATTGGAGGGATGTCATCCTTGGAGCTTTGGAACATGGCTGAGAATAAAAGCATGACAATCCCAGCACATGAGAATATAATCTCTGCTTTGGCACAGTCTCCTGTCACTGGAATGGTGGCCTCGGCCAGTCATGACAGTTCTGTGAAGTTATGGAAATAAATTTCAGAATTTAGGTGGTAACATGACATCTCTGTATTCTTTGTACAACTTATTCTTCGTTCACCCCAGTCTCCATTTAAAGCAACAAAGGGTCTCTGGACTAGATTTGCAATAATCCCCAGTGTAAAAGTTAGATGTGCAATATACTGATCTATTGTACAATTTAACAGTTTTGCATTATAAATTAATCCTGAGTTAACT 2553 0.4352 MTSSMAQSNWEADKMLDVYIHDYLLKRKLHASAKAFMTEGKVATDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEPAAAYIENQQMKAREQQLQMQQLQLMQQRNAQLQRRDPSHPALGGSLNAINSEGMLGQPPASVLALKMYEERMKHPQPMDSGASPALLDANRIALLKSASGHQGQLVQGNSGNMSTALQQIQARSPLTSDIKPEVNLGATTKSMPMDTSVYRQAILQSKSGLGSAGLNQGVTGLPLKGWPLTGIDQLRPNLGVQVPKPNLTTQNQFLLASQQQVLAQAQAQNNLGNSASYGDMDPRRLSSLPRGNLNAKDGQSTRNEGSMCSQVQSGSPKMKMAQMQHSSSQQEQLQQQLHQNNRKRKQHSSSGAANSTGTGNTVGPSPNSPPSTHTPGDGMNTASSMQHVNSVSKSLMMYGTEGTGGLASSSNLLQDDMERFGDVGTLEDNVESFLSNDGDGGGNLYGTVKPSPAEHQKESSKGFTFAEFGCIRTRNNSQVTCCHFSSDGKLLASAGHDKKVVLWNMDTLQTENTPEEHKSVITDVRFRPNSSQLATASVDKTVRLWDAANPTYCLQEYSGRNSPVMSLDFHPQKTDLFCFCDGDNEIRYWNINSSSCTRVSKGGTAQVRFQPRLGRRLAAASDKVVTIFDVETYTQIFSLQGHSEMVNYICWDANGDFLASVSRNWIKIWSLASGECLQELNSSENQFHSCVFHPSYSTLLVIGGMSSLELWNMAENKSMTIPAHENIISALAQSPVTGMVASASHDSSVKLWK 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00864 783 ProSiteProfiles Trp-Asp (WD) repeats profile. 544 576 IPR001680 GO:0005515
Bach14g00864 783 SMART WD40_4 497 534 IPR001680 GO:0005515
Bach14g00864 783 SMART WD40_4 744 783 IPR001680 GO:0005515
Bach14g00864 783 SMART WD40_4 623 659 IPR001680 GO:0005515
Bach14g00864 783 SMART WD40_4 580 620 IPR001680 GO:0005515
Bach14g00864 783 SMART WD40_4 662 700 IPR001680 GO:0005515
Bach14g00864 783 SMART WD40_4 537 576 IPR001680 GO:0005515
Bach14g00864 783 SMART WD40_4 703 742 IPR001680 GO:0005515
Bach14g00864 783 SUPERFAMILY WD40 repeat-like 505 783 IPR036322 GO:0005515
Bach14g00864 783 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 544 576 - -
Bach14g00864 783 ProSiteProfiles Trp-Asp (WD) repeats profile. 502 543 IPR001680 GO:0005515
Bach14g00864 783 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 5 783 IPR044716 GO:0003714
Bach14g00864 783 MobiDBLite consensus disorder prediction 322 369 - -
Bach14g00864 783 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 751 783 - -
Bach14g00864 783 Pfam LisH 14 40 IPR006594 GO:0005515
Bach14g00864 783 ProSiteProfiles LIS1 homology (LisH) motif profile. 12 44 IPR006594 GO:0005515
Bach14g00864 783 SMART Lish 12 44 IPR006594 GO:0005515
Bach14g00864 783 MobiDBLite consensus disorder prediction 376 414 - -
Bach14g00864 783 CDD WD40 506 783 - -
Bach14g00864 783 Coils Coil 83 113 - -
Bach14g00864 783 PRINTS G protein beta WD-40 repeat signature 521 535 IPR020472 -
Bach14g00864 783 PRINTS G protein beta WD-40 repeat signature 563 577 IPR020472 -
Bach14g00864 783 PRINTS G protein beta WD-40 repeat signature 770 783 IPR020472 -
Bach14g00864 783 Gene3D - 482 634 IPR015943 GO:0005515
Bach14g00864 783 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 502 537 - -
Bach14g00864 783 Gene3D - 635 783 IPR015943 GO:0005515
Bach14g00864 783 ProSiteProfiles Trp-Asp (WD) repeats profile. 587 629 IPR001680 GO:0005515
Bach14g00864 783 ProSiteProfiles Trp-Asp (WD) repeats profile. 751 783 IPR001680 GO:0005515
Bach14g00864 783 Pfam WD domain, G-beta repeat 543 576 IPR001680 GO:0005515
Bach14g00864 783 Pfam WD domain, G-beta repeat 506 534 IPR001680 GO:0005515
Bach14g00864 783 Pfam WD domain, G-beta repeat 666 700 IPR001680 GO:0005515
Bach14g00864 783 Pfam WD domain, G-beta repeat 748 783 IPR001680 GO:0005515
Bach14g00864 783 ProSitePatterns Trp-Asp (WD) repeats signature. 521 535 IPR019775 -
Bach14g00864 783 MobiDBLite consensus disorder prediction 302 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00864 Bach-Chr14 7871784 7879267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00864 520 768 U-box Gene Family AT2G33340 26.437 1.14e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Bach14g00864 WD40 0.027 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00864 - - cave:132165278 1234.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach14g00864 14 7871784 7879267 Bach14g00864 14 7871784 7879267 ECH