Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00817 ATGGCTTCGATGGGATCCTCGTACTGGTGCTACCGATGTGACCAATTCGTTAGGGTTCGAACTGGTGCTGAAGATAATCTACTCTGCCCTGATTGTGGAGCTGGTTTCGTGGAAGAAATCAGAACCCCTCGTCACTCTCCTTTCCATCGATTTCCTGCAGCGGCAATGTATGTGGATGATGGGTCTAACTCCGAGCATGGTTCAAGCCCAAGACTGCGTCGGAGCCGTAGGAATGGCGGGGATCGGTCGCCGTTTAACCCGGTTATTGTTCTCCGTGGAGCTTCTGATGGTGGGGGTGGCGGTGGAAATGATGGTGTTGGAGCTGAAAGAGGGAACTTTGAGCTTTATTACAACGAGGGTACTGGTTTGGGTCTTCGGCCTCTACCTGCAAGCGTCACGGAGTTCTTGATGGGTTCTGGATTTGACCATCTTCTTGAGCAGTTGTCTCAGTTAGAAGTGACTGGAATTGGGCGATTGGACCAGCCTCCGGCATCGAAGGCTGCGATAGAATCCATGCCCATTATCAAGATTCTCGCTACTCACGTTTCTGCGGACTCCCATTGTGCTATTTGTAAGGAACCGTTTGAGCTTGATACGGATGCTCGTGAAATGCCCTGTAATCACATTTACCATCCTGATTGTATCCTTCCATGGCTTTCAATTCGCAATTCCTGTCCAGTTTGTCGCCATGAGCTACCTACTGAGATCCGAGGGAGTGGCAGTGGCAGAAGCTCCCCTGTGTCTGATGGTAGTAGGGATGATGATGCTGTGGGATTAACCATATGGAGACTTCCAGGTGGTGGGTTTGCTGTAGGGAGGTTCACTGGGGGCAGAAGAGCTGCGGAACGTGAACTTCCTGTTGTATACACAGAAATGGACGGTGGATTCAATAATGTTGGTGTTCCAAGAAGGATTTCTTGGGAATCGGGCGTAAGAAGATCTAGGGAGACTAGGGGATTGGGTAGCGTAGTTCGCAACTTCTTCTCATATTTTGGAAGATTTAGGAATTCCTTCTCTCGTTCCTCCAGTGCTAATTCAGGGATGAGTGGAAGAACTCGTTCCAATACAATATTTACTAGATTTTCAAGGAGGAGCAGCTAG 1101 0.4923 MASMGSSYWCYRCDQFVRVRTGAEDNLLCPDCGAGFVEEIRTPRHSPFHRFPAAAMYVDDGSNSEHGSSPRLRRSRRNGGDRSPFNPVIVLRGASDGGGGGGNDGVGAERGNFELYYNEGTGLGLRPLPASVTEFLMGSGFDHLLEQLSQLEVTGIGRLDQPPASKAAIESMPIIKILATHVSADSHCAICKEPFELDTDAREMPCNHIYHPDCILPWLSIRNSCPVCRHELPTEIRGSGSGRSSPVSDGSRDDDAVGLTIWRLPGGGFAVGRFTGGRRAAERELPVVYTEMDGGFNNVGVPRRISWESGVRRSRETRGLGSVVRNFFSYFGRFRNSFSRSSSANSGMSGRTRSNTIFTRFSRRSS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00817 366 MobiDBLite consensus disorder prediction 341 366 - -
Bach14g00817 366 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 72 233 - -
Bach14g00817 366 Pfam Protein of unknown function (DUF1117) 257 361 IPR010543 -
Bach14g00817 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 235 IPR013083 -
Bach14g00817 366 SMART ring_2 188 228 IPR001841 -
Bach14g00817 366 SUPERFAMILY RING/U-box 168 235 - -
Bach14g00817 366 MobiDBLite consensus disorder prediction 66 80 - -
Bach14g00817 366 Pfam Ring finger domain 187 229 IPR001841 -
Bach14g00817 366 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Bach14g00817 366 MobiDBLite consensus disorder prediction 59 105 - -
Bach14g00817 366 Pfam zinc-ribbon 7 40 IPR039525 GO:0061630
Bach14g00817 366 ProSiteProfiles Zinc finger RING-type profile. 188 229 IPR001841 -
Bach14g00817 366 FunFam E3 ubiquitin-protein ligase RING1-like 150 235 - -
Bach14g00817 366 CDD RING-H2_RNF126-like 188 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00817 Bach-Chr14 7372683 7373783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00817 123 243 C3H Transcription Factor Family AT5G01980 43.802 6.00e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00817 K11982 - qsa:O6P43_026495 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach14g00817 14 7372683 7373783 Bach14g00817 14 7372683 7373783 ECH