Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00664 ATGCACAAGTACAAACCAGCCACCGGCAATACCCGCGCTGACCAGCATTACAGCAGTATCCAGCCTTGCCGCAGCACCCACCCAGCCGTGCAGTGTCGAGGACTGGTTGCATGCAACTATGGTGTATCTATAGCCTTTAAGGTGGATTATGGGTCCAATCCTTACTATTTTGCTATGGTAATTGAATACGAAAATGGGGATAGCGACCTTTCAGCAGTTGAGCTGATGCAGGCTCTACCATCAGACCCATGGCTTCCAATGCAAGAGTCTTGGGGTGCAGTTTGGAAACTGAACTCAGGTTCACCCCTACGAATTCCCTTCTCTATCAAGCTCACAGAGGGCGCCAACAAGATCGTTGTTGCCAACAACGTGATTCCGGCTGGTTGGATCCCGGGAAATACTTATCGTTCTGCGGTCAATTTCAGGCCACCTGTACATGGGCTTAAAGAGAAAATAAACATGGTTGAATGCGCAACTACCCTGGTATGTCAAATAGCGTTTCATGTGGACGCTGGCTCCAAACCTAACTATTTTGCTTCTCCAATTGAATATGAGGATGGGGATGGTGACCTTGCCGGAGTTGAGCTCAAACAAGCCCTTGACTCAGACTCATGGCTTCCCATGCAACAATCTTGGAGTGCAGTTTGGAAACTTAACATAGGATCAACCCTAAAAGCTCCGTTCTTCCACCGGCTAATGTCCGATTCCGGCAAGACTATTGTTGCCAACAATGTGATCCCGGCTGGGTGGACAACGGGTCAGACTTACCATTCAGTTGTGAATTTTCAAACCTAG 795 0.4843 MHKYKPATGNTRADQHYSSIQPCRSTHPAVQCRGLVACNYGVSIAFKVDYGSNPYYFAMVIEYENGDSDLSAVELMQALPSDPWLPMQESWGAVWKLNSGSPLRIPFSIKLTEGANKIVVANNVIPAGWIPGNTYRSAVNFRPPVHGLKEKINMVECATTLVCQIAFHVDAGSKPNYFASPIEYEDGDGDLAGVELKQALDSDSWLPMQQSWSAVWKLNIGSTLKAPFFHRLMSDSGKTIVANNVIPAGWTTGQTYHSVVNFQT 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00664 264 Pfam Expansin C-terminal domain 165 247 IPR007117 -
Bach14g00664 264 Pfam Expansin C-terminal domain 44 126 IPR007117 -
Bach14g00664 264 SUPERFAMILY PHL pollen allergen 164 258 IPR036749 -
Bach14g00664 264 PRINTS Major pollen allergen Lol pI signature 183 198 IPR005795 GO:0005576|GO:0019953
Bach14g00664 264 PRINTS Major pollen allergen Lol pI signature 167 182 IPR005795 GO:0005576|GO:0019953
Bach14g00664 264 PRINTS Major pollen allergen Lol pI signature 214 231 IPR005795 GO:0005576|GO:0019953
Bach14g00664 264 PRINTS Major pollen allergen Lol pI signature 234 251 IPR005795 GO:0005576|GO:0019953
Bach14g00664 264 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 258 IPR007117 -
Bach14g00664 264 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 55 137 IPR007117 -
Bach14g00664 264 PANTHER EXPANSIN-B3 36 141 - -
Bach14g00664 264 Gene3D - 163 263 IPR036749 -
Bach14g00664 264 Gene3D - 39 142 IPR036749 -
Bach14g00664 264 SUPERFAMILY PHL pollen allergen 44 137 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00664 Bach-Chr14 5371085 5375388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00664 165 262 Expansin Gene Family AT1G65680 56.566 2.66e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00664 - - cave:132167565 164.466