Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00663 ATGGGTCTTATTCAATGCTGCTCCTATATCTCTTCTCTCCTAGTTCTTTATTCTCTATTAGGTAACCCTTCCAGTTCTCTCAACCCAGAATCTGTGAATGTTTCAAGAGTACTTCAAAGTGAAGTTGAATGGAAATCAGCTGCTGCTACATGGTATGGAGATCCAAATGGCGTCGGATCGGATGGGGGAGCTTGTGGATATGGTTTTGCTGTGGAATACCCTCCATTCAATAAAATGGTATCAGCAGTGGGCCCTTCTCTGTATGATTTGGGAAAAGGATGTGGAGCTTGTTATCAGGTGAAATGCACAGAAAATGCTGCATGCTCAGGAAACCCAGTTACCGTGGTTACAACTGATAGTTGCCTTGGTTGCTCTAGGCAAGACCATTTTGATCTGAGTGGTACTGCATTTGGTGCCATGGCAAAACCAGGCCAAGCTGATAATCTTCGCAACGTTGGACTCCTTCAAGTTCTATACACAAGGGTTGCATGTAACTATGGTGTATCCATAGCCTTTACGGTGGATAAAGGGTCCAATTCTTACTATTTGGCTATGGCAATTGAATACGAAAATGGGGATAGCGACCTTTCAGCAGTTGAGCTGAAGCAGGCTCTACCATCTGACCCATGGCTTCCAATGCAAGAGTCTTGGGGTGCAGTTTGGAAACTGAAATCAGGTTCACCCCTACGACCTCCCTTCTCCATCAAGCTCACTGAAGGCGCCAACAAGAATGACCAGACTGTTGTAGCCAACAACGTGATTCCGGCTGATTGGACCCCGGGAAATACTTATCGTTCTGTGGTCAATTTCTCGCCACCTGCACATGCTTAA 831 0.4573 MGLIQCCSYISSLLVLYSLLGNPSSSLNPESVNVSRVLQSEVEWKSAAATWYGDPNGVGSDGGACGYGFAVEYPPFNKMVSAVGPSLYDLGKGCGACYQVKCTENAACSGNPVTVVTTDSCLGCSRQDHFDLSGTAFGAMAKPGQADNLRNVGLLQVLYTRVACNYGVSIAFTVDKGSNSYYLAMAIEYENGDSDLSAVELKQALPSDPWLPMQESWGAVWKLKSGSPLRPPFSIKLTEGANKNDQTVVANNVIPADWTPGNTYRSVVNFSPPAHA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00663 276 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 181 266 IPR007117 -
Bach14g00663 276 PRINTS Expansin/Lol pI family signature 61 79 IPR007118 GO:0005576
Bach14g00663 276 PRINTS Expansin/Lol pI family signature 210 224 IPR007118 GO:0005576
Bach14g00663 276 PRINTS Expansin/Lol pI family signature 252 266 IPR007118 GO:0005576
Bach14g00663 276 PRINTS Expansin/Lol pI family signature 84 102 IPR007118 GO:0005576
Bach14g00663 276 PRINTS Expansin/Lol pI family signature 43 58 IPR007118 GO:0005576
Bach14g00663 276 PRINTS Expansin/Lol pI family signature 152 168 IPR007118 GO:0005576
Bach14g00663 276 CDD DPBB_EXPB_N 44 164 - -
Bach14g00663 276 Pfam Expansin C-terminal domain 170 255 IPR007117 -
Bach14g00663 276 SMART dpbb_1 80 159 IPR007112 -
Bach14g00663 276 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 62 169 IPR007112 -
Bach14g00663 276 Gene3D - 30 165 IPR036908 -
Bach14g00663 276 SUPERFAMILY PHL pollen allergen 170 266 IPR036749 -
Bach14g00663 276 Gene3D - 166 271 IPR036749 -
Bach14g00663 276 PANTHER EXPANSIN-B3 20 270 - -
Bach14g00663 276 PRINTS Major pollen allergen Lol pI signature 188 203 IPR005795 GO:0005576|GO:0019953
Bach14g00663 276 PRINTS Major pollen allergen Lol pI signature 102 112 IPR005795 GO:0005576|GO:0019953
Bach14g00663 276 PRINTS Major pollen allergen Lol pI signature 141 156 IPR005795 GO:0005576|GO:0019953
Bach14g00663 276 PRINTS Major pollen allergen Lol pI signature 172 187 IPR005795 GO:0005576|GO:0019953
Bach14g00663 276 PRINTS Major pollen allergen Lol pI signature 219 236 IPR005795 GO:0005576|GO:0019953
Bach14g00663 276 PRINTS Major pollen allergen Lol pI signature 119 134 IPR005795 GO:0005576|GO:0019953
Bach14g00663 276 Pfam Lytic transglycolase 82 157 IPR009009 -
Bach14g00663 276 SUPERFAMILY Barwin-like endoglucanases 43 166 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00663 Bach-Chr14 5366973 5368142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00663 22 270 Expansin Gene Family AT1G65680 58.964 3.64e-103 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00663 - - qsu:112000116 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach14g00663 14 5366973 5368142 Bach14g00663 14 5366973 5368142 ECH