Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bach14g00662 | ATGGCTTTGATTGTGGATCAACAACAAAACTTCAAGCACTTTTGTAAAATTTGCAAGAAAGGTTTTGGATGTGGGAGAGCTCTTGGAGGGCACATGAGGGCACATGGAATTGGTGACGAGAGTGGGCAAATGGACGATGATGATCCGGCGAGTGATTGGGAAGACAAGCTTGGAGGGAACGTCCCTCCCAGCAACAAACGCATGTACGCATTAAGAACAAACCCTAACAGGCTCAAGAGCTGTAGGGTCTGTGAGAATTGTGGTAAAGAGTTCTTATCATGGAAGTCTTTTCTTGAACATGGAAAGTGCACTTCTGAAGATGCTGAATCCCTGGTCTCATCTCCGTGCTCCGACGGAGAAGACGACATGGGAGGCCGGAGAGGTTGTGGTGGTTGGTCCAAAAGGAAAAGATCATTTAGAGCCAAAGTGGGTAACTTCAATTCTAATTGTGCATCAAGTGAGGAAGAAGACCTTGCCAACTGTTTGATGATGTTGTCCAATGCCGCCGTTGATCCTCTCGTGGCGGAGCCGGAGGAGTCTTGTGCCTCAGCTAGCAAAGATGAAGAGAGAAGAAACCCCTTGAATTTCATTGCACCAATGTCATATAGGGTTCCGGTAGACAACAAAGCCAAAGGGGTTGCCAAGGGTTTGTTTGAATGCAAGGCTTGTAAGAAGGTCTTCAATTCCCACCAAGCATTGGGTGGCCATAGAGCAAGCCACAAGAAGGTTAAGGGTTGCTTCGCCGCCCGCCTCGACCAACTCGACGAAAGCATCGCCGATGATGACGTCATCACACATGAAGAATATGTCCCAATAAAATCAAACACCAACCTCCAATTTGATCATGGTATTAACAGCAATGCCACGTTGGCTTCCTCTTCCAAGAGGAAATCTAAAGTGCATGAATGCTCCATATGTCACCGGATTTTCTCGTCGGGACAAGCATTGGGAGGACACAAGAGGTGCCATTGGATCACATCAAATGCACCAGACACTTCCACATTGGCTAGATTTCAGCAATTTCAAGATCACATGGAGCATAATATGAGTCAAATACCAAAGTTTGATAACTCAGAGCCACTTGATCTCAAGCTCGATCTCAACCTTCCGGCACCGGCCGATGACCTAGCCGGAGCCCGGCGGGACGTGACAACGGAGATTTACTTTCAGTCATGGGTAGGAAGAAAGGACAAAGATACTAATACTAACAGCCAACGTCACAGCCACGGCCACCATCATCACCATTCTCACAAAAAAGATCATAATGACAACATGGTCGACGAGGACAAAAACAATGACAACAGTAATGCTTCATTGCCAAATATTGTGGAAGATGAAGCTGACAGTAAGGTAAAGTTAGCAAAACTAAGCGAGCTAAAAGACATCAACATAGCTGGGAGTTCCTCACCATGGTTGCAGGTGGGAATTGGTTCAACAACCGATGTGGGAGCTGACCCATAA | 1461 | 0.4661 | MALIVDQQQNFKHFCKICKKGFGCGRALGGHMRAHGIGDESGQMDDDDPASDWEDKLGGNVPPSNKRMYALRTNPNRLKSCRVCENCGKEFLSWKSFLEHGKCTSEDAESLVSSPCSDGEDDMGGRRGCGGWSKRKRSFRAKVGNFNSNCASSEEEDLANCLMMLSNAAVDPLVAEPEESCASASKDEERRNPLNFIAPMSYRVPVDNKAKGVAKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDQLDESIADDDVITHEEYVPIKSNTNLQFDHGINSNATLASSSKRKSKVHECSICHRIFSSGQALGGHKRCHWITSNAPDTSTLARFQQFQDHMEHNMSQIPKFDNSEPLDLKLDLNLPAPADDLAGARRDVTTEIYFQSWVGRKDKDTNTNSQRHSHGHHHHHSHKKDHNDNMVDEDKNNDNSNASLPNIVEDEADSKVKLAKLSELKDINIAGSSSPWLQVGIGSTTDVGADP | 486 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bach14g00662 | 486 | MobiDBLite | consensus disorder prediction | 397 | 444 | - | - | |
| Bach14g00662 | 486 | PANTHER | OS02G0659100 PROTEIN | 2 | 482 | - | - | |
| Bach14g00662 | 486 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 303 | 323 | IPR013087 | - | |
| Bach14g00662 | 486 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 220 | 240 | IPR013087 | - | |
| Bach14g00662 | 486 | Pfam | C2H2-type zinc finger | 218 | 242 | - | - | |
| Bach14g00662 | 486 | Pfam | C2H2-type zinc finger | 300 | 325 | - | - | |
| Bach14g00662 | 486 | Pfam | C2H2-type zinc finger | 13 | 35 | - | - | |
| Bach14g00662 | 486 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 301 | 323 | IPR013087 | - | |
| Bach14g00662 | 486 | Gene3D | Classic Zinc Finger | 10 | 103 | - | - | |
| Bach14g00662 | 486 | SUPERFAMILY | beta-beta-alpha zinc fingers | 13 | 101 | IPR036236 | - | |
| Bach14g00662 | 486 | MobiDBLite | consensus disorder prediction | 36 | 60 | - | - | |
| Bach14g00662 | 486 | SUPERFAMILY | beta-beta-alpha zinc fingers | 217 | 323 | IPR036236 | - | |
| Bach14g00662 | 486 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 15 | 35 | IPR013087 | - | |
| Bach14g00662 | 486 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 218 | 245 | IPR013087 | - | |
| Bach14g00662 | 486 | SMART | c2h2final6 | 218 | 240 | IPR013087 | - | |
| Bach14g00662 | 486 | SMART | c2h2final6 | 13 | 35 | IPR013087 | - | |
| Bach14g00662 | 486 | SMART | c2h2final6 | 301 | 323 | IPR013087 | - | |
| Bach14g00662 | 486 | Gene3D | Classic Zinc Finger | 216 | 323 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bach14g00662 | Bach-Chr14 | 5359556 | 5361016 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bach14g00662 | 97 | 369 | C2H2 Transcription Factor Family | AT1G02040 | 34.495 | 7.25e-33 | 125 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | C2H2 | Bach14g00662 | zf-C2H2_6 | 2.7e-11 | CL0361 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bach14g00662 | - | - | rcu:8265845 | 734.176 |