Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00606 ATGAGTTTTTTGCAGGGACTCATTGACTCGCTTAGCTCCGTCTTCTCTTCCCCCGGCTCTTCTTCTAATGATTCCCACCAAAATCCCACCTTTTCCCGTTCTTCTTCTTCACCAATGGAAGGCGTAGCTGGGCCTTCAGTTTCCAATGAACGTGTCGCTTACAAGCTCAAAGGGTACTTCGATTTGGCCAAGGAAGAGATTGCCAAAGCTGTTAGGGCGGAAGAGTGGGGCTTGATCGATGATGCTATTCTTCACTACAAGAACGCTCAGCGAATTCTGATTGAAGCCAGTTCAACTAGTGCGCCTTCCTTCATCAGTTCCAGTGAACAAGAGAAGGTGAAATCATATCGTCAAAAAACTTCAAAATGGCAGGGTCAAGTTGCCGAGAGATTACAGACTCTAAGTAGACGAGCAGGTAGGACGTCTACTGATCAGAGCACCTCAACTCGTGCACAAACTGCATCAGTTTCAATTACTCCCTCAAATGCTAGAAGAAGTGTGCCACAAAAGTATCCTCGAAGAACTAATCAGACAGATAAAGTGGCAAGCCCAAAATCAAGCCAACCTCCTGGAGCAAATTATGATGCAAAATTGGTTGAAATGATTAATACTGCAATAGTAGATAGAAGTCCTTCTGTTAGATGGGAGGATGTTGCTGGTCTTGAAAAGGCTAAGCAAGCTCTAATGGAAATGGTTATTTTACCAACTAAAAGAAGAGACTTGTTCACTGGTCTTCGGAGGCCAGCCAGAGGTCTGCTTCTCTTTGGTCCACCTGGTAATGGAAAAACCATGCTTGCTAAAGCAGTGGCTTCAGAGTCAGAAGCAACATTTTTTAATGTCTCTGCAGCTTCATTGACATCAAAATGGGTGGGTGAAGCTGAAAAGCTTGTCCGGACTCTATTCATGGTAGCTATATCCAGACAACCATCCGTGATTTTCATTGATGAGATTGATAGTATTATGTCAACAAGGTTGGCTAATGAGAATGATGCAAGCAGACGACTAAAATCCGAATTTCTAATTCAGTTTGATGGCGTGACCTCTAATCCTGATGATATTGTCATTGTCATTGGTGCCACCAATAAGCCACAGGAATTGGACGATGCAGTTCTTAGGAGACTGGTTAAAAGAATATACATACCTTTACCAGATGAAAATGTTCGGAGACTTTTACTAAAAACCAAACTCAAGGGTCAAGCATTCTCCTTACCTGGTGGAGATTTAGAAAGGCTTGTAAAGGAGACCGAAGGATATTCTGGAAGCGATCTACAAGCCTTGTGCGAAGAAGCTGCAATGATGCCAATTAGAGAACTGGGTTCTGACATACTCACTGTTAAGGCAAATCAGGTAAGAGGGCTGAGGTATGAGGATTTTAAGAAGGCTATGACAGTGATTAGACCTAGCTTAAACAAAAGCAAGTGGGAAGAGCTTGAACTTTGGAATGGGGAGTTTGGCTCTAATTGA 1464 0.4303 MSFLQGLIDSLSSVFSSPGSSSNDSHQNPTFSRSSSSPMEGVAGPSVSNERVAYKLKGYFDLAKEEIAKAVRAEEWGLIDDAILHYKNAQRILIEASSTSAPSFISSSEQEKVKSYRQKTSKWQGQVAERLQTLSRRAGRTSTDQSTSTRAQTASVSITPSNARRSVPQKYPRRTNQTDKVASPKSSQPPGANYDAKLVEMINTAIVDRSPSVRWEDVAGLEKAKQALMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWVGEAEKLVRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTSNPDDIVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVRRLLLKTKLKGQAFSLPGGDLERLVKETEGYSGSDLQALCEEAAMMPIRELGSDILTVKANQVRGLRYEDFKKAMTVIRPSLNKSKWEELELWNGEFGSN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00606 487 CDD RecA-like_spastin 217 380 - -
Bach14g00606 487 ProSitePatterns AAA-protein family signature. 354 373 IPR003960 GO:0005524|GO:0016887
Bach14g00606 487 Gene3D - 48 138 - -
Bach14g00606 487 MobiDBLite consensus disorder prediction 14 43 - -
Bach14g00606 487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 484 IPR027417 -
Bach14g00606 487 SMART AAA_5 248 384 IPR003593 GO:0016887
Bach14g00606 487 FunFam Spastin, putative 211 394 - -
Bach14g00606 487 Gene3D - 383 465 - -
Bach14g00606 487 FunFam AAA-type ATPase family protein 49 138 - -
Bach14g00606 487 MobiDBLite consensus disorder prediction 134 193 - -
Bach14g00606 487 Pfam AAA+ lid domain 407 438 IPR041569 -
Bach14g00606 487 PANTHER AAA DOMAIN-CONTAINING 106 486 - -
Bach14g00606 487 MobiDBLite consensus disorder prediction 134 190 - -
Bach14g00606 487 Gene3D - 211 481 IPR027417 -
Bach14g00606 487 FunFam AAA-type ATPase family protein 383 465 - -
Bach14g00606 487 SMART smart 56 133 IPR007330 -
Bach14g00606 487 CDD MIT_spastin 56 134 - -
Bach14g00606 487 MobiDBLite consensus disorder prediction 14 46 - -
Bach14g00606 487 Pfam ATPase family associated with various cellular activities (AAA) 252 382 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00606 Bach-Chr14 4676297 4681285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00606 211 437 Calmodulin-binding Proteins AT3G56690 42.797 5.37e-48 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00606 K13254 - qsa:O6P43_027119 768.074