Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00580 ATGGGTCGAGGTAGAGTTGAACTGAAGAGGATAGAGAACAAAATCAACCGCCAGGTTACTTTCTCAAAAAGAAGAAATGGTTTGCTCAAGAAAGCCTATGAACTCTCAGTGTTGTGTGATGCTGAGGTTGCCCTTATCATTTTCTCCAGCCGTGGCAAGCTCTATGAATTTGGAAGCTCTGGCGTTACCAAAACCCTTGAAAGATACCAGCGCTGCTCCTTTACTCCTCACGACAACACTACTGTTGAACTTGAAACTCAGAACTGGTTCCAAGAGGTGTCGAAGCTAAAGGCAAAGTATGAGTCTCTTCAACGGACTCAAAGGCATTTGCTTGGGGAAGATCTTGGACCATTGAACGTGAAAGAGCTTATAAATCTTGAGAAGCAGCTTGAAGGAGCCCTAGCACAAGCTAGGCAAAGGAAGACGCAAATTATGATTGAACAAATGGAAGATCTTCGCAGAAAGCTTGAATCAGAGGGGTTTAATCTTAAAGCCAATGAAAGCTTGTGGAGCTCTAGTTCAGCACCGGGAAACAGCAGCTTTCTCATGCAGTCTTCTCAAACCAACCCTATGGAATTATGTCAAGCAGAACCCAATTTCTTGCAAATAGGGTACCATCACTATGTTCAAGCTGAGACGTCAAGTGTTACAAAGACCATGGCTGGAGAGACTAACTTCATGCAGGGATGGGTCCTTTGA 699 0.4421 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSSGVTKTLERYQRCSFTPHDNTTVELETQNWFQEVSKLKAKYESLQRTQRHLLGEDLGPLNVKELINLEKQLEGALAQARQRKTQIMIEQMEDLRRKLESEGFNLKANESLWSSSSAPGNSSFLMQSSQTNPMELCQAEPNFLQIGYHHYVQAETSSVTKTMAGETNFMQGWVL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00580 232 FunFam MADS-box transcription factor 1 13 86 - -
Bach14g00580 232 Pfam K-box region 85 157 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach14g00580 232 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach14g00580 232 CDD MADS_MEF2_like 2 73 IPR033896 GO:0000977|GO:0045944
Bach14g00580 232 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach14g00580 232 ProSiteProfiles K-box domain profile. 86 179 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach14g00580 232 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach14g00580 232 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach14g00580 232 Gene3D - 13 79 IPR036879 GO:0003677|GO:0046983
Bach14g00580 232 SUPERFAMILY SRF-like 2 89 IPR036879 GO:0003677|GO:0046983
Bach14g00580 232 Coils Coil 120 166 - -
Bach14g00580 232 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach14g00580 232 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach14g00580 232 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach14g00580 232 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00580 Bach-Chr14 4361959 4365971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00580 1 232 MADS-box Gene Family AT2G45650 62.205 4.50e-102 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach14g00580 K-box 1.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00580 K09264 - gmx:100820061 358.221