Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00542 AATCACTCTTTTCCTCTCTCAGTTGCTGAAATCCGAATTAGCCCTTTGCTTCATTCTGGCTAATGACAAAAAAGCATCGTTGTTTTCGATTTCAGACACCCAATTATGTTTCTTCAATCTGGTCCTTGAATTGATATGATCATCTTCAGACCAGGCATAGAAAACCCAGATTTTTCCCCGTTAAAATTCTTCCAGAAAAATTGCTGTATTTGATCAAATAATCTTCTTTCATTTTCAAAATCCAATAACTGTTTCCAGTTATCTCCGATCATTTTCTTACATATCCAGTTCAGCTTCTTTCTTAAACTGCTAGAAAATGCACAATTCAACCCCAGCATCTTCTTCTCCACCCGATGCAGCTGTCGACAGCTCACCCCTCCTCAGCCACTCCTTCTCCGACCAAATGAGCAGGAGCCGCCGCTTCATACACCGTACTCCGCCGCCTTTACGGGTTGCTGCGCGGTTCCTCCGTCGCGCTAGTGGGCGCCGGATGATGCTCCGGGATCCCTCCGTGCAGGTCCGGGAGAACGCTGCGGAGCAGCTGGAGGAGCGCCAGAGCGATTGGGCTTACTCTAAGCCGGTGATCATGTTGGATATCTTGTGGAATATGGCGTTTCTAGCAATTGGGGTCACTGTGTTGGGACTGAGCACCAGGGAAAACCCATCTATGCCTTTGAGGCTGTGGATTGTTGGCTACTTGTTGCAGGGTGTGTTTCACTCTTTGTGTGTGATTATGGAATATAGGCGAAGGAGCCAAGCAAGTACTACCGGGAATTGGGGAAGTGGTGGAGACTCTAATTTTAGTTCTGGGAGTGATGGAGAGGATTCTGCTACGGAGCAGCTGCAGGAGAATGATGATAACAGCATTATAAAGCACATGGAGTCTGCAAATACCATGTTTTCATTCATATGGTGGACTATGGGATTCTACTGGGTAACTTCTGGCGGCCAGAGTTTGACAAGTGATTCACCTCAGCTTTACTGGCTTTGTATTACGTATCTCGCTTTCGATGTTGTGATCTTACTGATCTGTGTCGCTGTTGCGTGCCTTATTGGTATTGCTGTTTGCTGCTGCTTGCCGTGCATAATTGCTATCTTGTATGTTGTTTCAGATCAGGAAGGAGCAACCAAAGAAGAGATCGATCAATTGCGAAAATACAAGTTCCGGAGGATTGATGAATTTCAGAAAGATAATAGTGATATTCAAGAATCCTCCAGAGGAATAATAACAGAATGTGATAGTGATACACCTGTAGAACATGTTCTTCCCTTGGAAGATGCAGAATGCTGTATCTGCCTTTCTGCCTACGATGATGGAGCTGAACTTAGAGAACTCCCTTGTAACCACCATTTTCATTGTGCCTGCATTGACAAGTGGTTACACATAAATGCTACCTGTCCTCTCTGCAAGTTCAACATTTTGACAAATGACAGCAGCAGCCAAGAAGTTTAA 1453 0.4494 MHNSTPASSSPPDAAVDSSPLLSHSFSDQMSRSRRFIHRTPPPLRVAARFLRRASGRRMMLRDPSVQVRENAAEQLEERQSDWAYSKPVIMLDILWNMAFLAIGVTVLGLSTRENPSMPLRLWIVGYLLQGVFHSLCVIMEYRRRSQASTTGNWGSGGDSNFSSGSDGEDSATEQLQENDDNSIIKHMESANTMFSFIWWTMGFYWVTSGGQSLTSDSPQLYWLCITYLAFDVVILLICVAVACLIGIAVCCCLPCIIAILYVVSDQEGATKEEIDQLRKYKFRRIDEFQKDNSDIQESSRGIITECDSDTPVEHVLPLEDAECCICLSAYDDGAELRELPCNHHFHCACIDKWLHINATCPLCKFNILTNDSSSQEV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00542 378 MobiDBLite consensus disorder prediction 1 21 - -
Bach14g00542 378 Pfam Ring finger domain 323 365 IPR001841 -
Bach14g00542 378 ProSiteProfiles Zinc finger RING-type profile. 324 365 IPR001841 -
Bach14g00542 378 FunFam E3 ubiquitin-protein ligase At1g12760 310 375 - -
Bach14g00542 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 308 371 IPR013083 -
Bach14g00542 378 SMART ring_2 324 364 IPR001841 -
Bach14g00542 378 MobiDBLite consensus disorder prediction 149 172 - -
Bach14g00542 378 PANTHER TARGET OF ERK KINASE MPK-1 54 371 - -
Bach14g00542 378 SUPERFAMILY RING/U-box 314 371 - -
Bach14g00542 378 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00542 Bach-Chr14 4103304 4106542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00542 4 372 C3H Transcription Factor Family AT1G68070 46.113 2.18e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00542 - - qsa:O6P43_027190 599.742