Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00500 ATGCAATCTGCTGGCGGTGGCGGTGGCGGGCCCGGCCGGAACCCGGGTGTGGGGCCGGTAGGGCGGGCAACATCGACATCTTCAGCTGCGTCACCATCTTCTTCTTCTTCGTCGCACTTGGGGTTAGACTCGTTACAGCAGCAGCAGCAAATAGCAGGTTCTAGACAGTCATTGCAACAGCAACTACTTAGAAAACCTGAAGGGAATGAAGCCTTTCTAGCATATCAGGCTGGGCTTCAAGGGGTATTTGGGAGTAACAATTTCTCGTCTCCTGCTACTATGCAACTGTCTCAACAGTCCCGGAAATTCATTGATTTAGCTCAACATGGTTCCAGCCAGGAGGCCCAGCTCAGGGGTCAAGGTGTTGAGCAACAAATGCTAAATCCTGTACAGCAGGCATACATGCAGTATGCTTTGCAGGCCCAACAAAAGTCTGCTCTGGCAATGCAATCACAGCAGCAAACTAAAATGGGAATGTTAGGCTCTTCATCTGTAAAGGATCAGGAAATGCGAATGGGAAACTTGAAAATGCAGGACCTTATGCCTATGCAGGCAGTGAATCAAGCTCAAGCATCAACATCGCGAAATTCATCTGAACATTTTACTCGTGGGGAAAAGCAGATTGAGCAAGGACAGCAGCAAGTACCTGAGCAGAAGGGTGAGGGGAAACCTTCAACCCAGGGTCCGGCTGTTGGACATTTAATGCCTGGAAATATGATAAGACCTGCACAAGCACCGGCAACTCAGCAGGGCATCCAAAATGTTGCAAACAACCAGATTCCAGTGTCTGCTCAATTGCATGCTATGCAAGCATGGGCTCATGAACGTAATATAGACCTATCTCATCCTGGAAATGCTAACTTGATGGCTCAGCTCATTCCATTGATGCAATCAAGGATGGTTTCACAACAAAGGGCAAATGATAACAGTGTTGGTGCTCAATCATCACCAGTCCCTGTTTCAAAGCAGCAGGTTACTTCTGCAGCAGTTGTAAGTGAGAACTCAGCACATGCTAATTCATCAAGTGATGTGTCTGGGCAATCAGGTTCTGCAAAGGCCAGGCAGACAGTTCCACCCAGCCATTTTGGTCCACCAACAAATGTTGGTATAGCCAGTAATGCCAATGACATGTCTGTGCAGCAGTTTAGTGTTCATGGCAGAGAGTCTCAATCACACCTGAGGCCGCCAGTAGTTGGCAATGGAATGCCTCCTATGCATCCCCAACAGTCTTCTGGCAATGTGAACCCAGGTGCTGAACCTCCACAAATGCAGTACATCAGGCAGTTAAAACAACCTTCTCCTCAGTCTGCTGGTCCATCAAACGAAGGAGGTTCAGGAAATCATGTCAAATCCCAAATGGTACCAGCTCAGATGCCTCAACATCTTGGATTTACTAAACAGCAATTGCATGTTCTTAAAGCACAGATACTAGCATTCAGGCGGCTGAAGAAAGGTGAAGGTACACTCCCACAAGAACTTCTTCGAGCTATTGCTCCACCACCTCTTGAATTGCAAGTGCAGCAGCTAAGTCATCCTGTGGGAGAAAAAAGTCAAGATAAATCTGTTGTAAATATTGTTCCAGAAAGCCCAGTGCAGATTGATTCTACGGCAAAGGATTCACAATCTTTCCCAGCAACTAATGGACCAAGTTCTTCTAAGCAGGAAACCTTTGCTAGAGATGATAAAGCCGCTGTAACAGCAGTTCATATGCAAGCTATACCAGCTGTAACAAAGGAATCTATGCCATCCTTACCTGCTAGAAAGGAAGATCAGCAATCAATTGGATCCTCTATTAAGCCAGACCAGGAAAATGAACGTGGAATTAACAGAACTACTGTGAGAAATGAGTTGCCATTAGATAGGGGAAAGGCTATTGCACCACAGGCCCCTGTATCTGATGCAATGCAAATTAAGAAACCTGCACAAGTAAATACTGTTGCCCCATCAAAGGATTTGGCCTTAACCAGAAAATATCATGGACCCCTATTTGATTTCCCCTTCTTCACCAGGAAACCAGAATCCTTTGGGTCATCGATGATGATAAATAATAATAATTTGTCTCTGGCATATGATGTTAAAGATCTTCTCTTTGAGGAGGGTGTGGAAGTTCTGAATAAGAAAAGGACTGAAAATTTAAAGAAGATTGAAGGTTTATTGGCAGTGAACTTAGAGAGAAAAAGGATTAGGCCAGATCTGGTCTTGAAGTTGCAAATTGAAGAGAAAAAACTTCGTCTTTTAAATCTTCAGGCCCGTTTAAGGGATGAGATTGATCAACAACAGCAAGAAATAATGGCAATGCCTGACAGGCCGTATCGTAAGTTTGTTAGGCTGTGTGAGCGCCAACGTCTAGAACTATCTAGACAAGTGCAGGCCTCACAAAGGGCTTTAAGGGAAAAGCAACTCAAGTCTATGTTTCAGTGGCGTAAGAAGCTTCTTGAGGCACATTGGGCCATTCGTGATGCTCGAACTGCCCGCAATAGAGGGGTGGCCAAATATCATGAGAGAATGTTGAGGGAGTTCTCAAAACGTAAAGATGATGACAGGAACAAAAGGATGGAAGCCCTCAAAAATAATGATGTTGACAGATATAGGGAGATGCTGCTGGAACAGCAGACTAGCATGCCGGGTGATGCTGCAGAGAGATATGCTGTTCTTTCATCTTTCTTAAGCCAGACAGAAGAGTATCTTCATAAATTGGGAAGTAAGATAACAGCTGCCAAAAACCAACAGGAAATGGAGGAGGCAGCAAGAGCTGCAGCAACTGCTGCACGGTTGCAGGGTCTCTCTGAAGAAGAAGTTAGAGCTGCAGCAGCTTGTGCTGGAGAAGAAGTGATGATTAGAAATCATTTTATGGAGATGAATGCTCCGAAAGACAGTTCATCTGTTCGCAAGTATTACAGCCTTGCTCATGCTGTGAACGAAAAGGTCATTAGTCAACCTTCAATGTTACGGGCTGGAACTTTGAGAGACTATCAGCTTGTTGGCTTGCAATGGATGCTTTCTTTGTACAACAACAAATTAAATGGAATTTTGGCAGATGAGATGGGTCTTGGTAAAACTGTTCAGGTTATGGCATTGATAGCCTATTTGATGGAATTTAAAGGAAACTATGGTCCACATCTTATTATAGTCCCCAATGCTGTTTTGGTTAACTGGAAGAGCGAGTTGCACACTTGGTTACCGTCTGTGTCATGCATCTATTATGTTGGAGGGAAGGATCAAAGGTCAAAACTATTTTCTCAAGTGGTTTCTGCTATGAAGTTTAATGTCCTTGTGACAACTTATGAGTTTATCATGTATGACCGGTCAAAACTTTCTAAAATTGATTGGAAATATATCGTAATTGATGAAGCACAGAGGATGAAGGACAGGGATTCGGTTCTAGCCCGTGATCTTGATAGATATCGTTGTCAGAGACGCCTACTTCTGACAGGAACTCCATTACAGAATGATTTGAAGGAACTCTGGTCCCTGTTAAACTTACTTCTTCCAGAGGTTTTTGACAATCGAAAAGCTTTTCATGATTGGTTTTCAAAACCTTTTCAAAGGGAAGGTCCTACTCAAAATGCAGAGGACGATTGGCTTGAGACAGAGAAAAAGGTTATCATTATCCACCGACTTCATCAAATTCTTGAGCCTTTCATGCTTAGGCGTCGTGTTGAAGATGTTGAAGGCTCACTACCTCCAAAGGTCTCCATAGTTTTGAGATGTAGAATGTCAGCTTTCCAGAGCTCCATATATGACTGGGTGAAATCTACTGGTACACTTCGTCTTGATCCTGAGGATGAGAAGCGTAGGGTTGAAAAGAATCCAGTCTACCAGGCCAAGCAGTATAAAACTTTAAATAACAGATGTATGGAGCTGCGTAAAACTTGCAATCATCCATTGCTTAATTATCCATACTTCACCGATTTGTCCAAGGATTTCCTTATCAGATCATGTGGGAAGTTGTGGATCCTGGATAGGATCCTTATAAAACTTCAGAGAACTGGACATCGCGTTCTGCTCTTCAGTACTATGACTAAACTCCTAGACATATTGGAAGAATACCTGCAATGGAGACGACTTGTGTACAGAAGAATTGATGGGACAACGAGTTTGGAAGACCGTGAATCAGCTATAGTGGACTTCAATGGCCAAGATTCAGACTGTTTCATCTTCTTGCTTAGTATTCGTGCTGCAGGACGAGGCCTGAACCTGCAGTCTGCTGATACAGTTATTATATATGATCCTGATCCAAACCCTAAAAATGAGGAACAGGCAGTTGCCAGAGCCCATCGCATTGGACAGACAAGAGAAGTCAAAGTTATCTACATGGAAGCAGTTGTTGACAAAATCCCTAGCCACCAGAAAGAGGATGAACTGAGAAGTGGGGGCATTGTTGATTTGGAGGATGAACTTGCTGGTAAGGATCGCTATATAGGAACCATTGAGAGCCTCATAAGGAACAATATTCAACAATATAAGATAGACATGGCTGATGAGGTAATCAATGCTGGGCGTTTTGACCAAAGAACAACACATGAAGAGAGGCGCATGACTTTGGAGACATTATTACATGATGAGGAAAGGTATCAAGAAACTGTCCATGATGTTCCCTCACTACAGGAAGTAAATCGCATGATTGCTAGGAGTAAAGAGGAGGTTGTCTTGTTTGATCAAATGGATGAAGAATTGGATTGGACTGAGGAGATGACCCAGCATGATCAAGTGCCTAAATGGCTTCGAGCAAGCACCAAAGAGGTGAATGCCACAATCGCAGCTTTATCAAAAAAACCATCAAAGAACATTCTCTGGGGCAGTAATACTGGTGTGGAATCCAGTGAAATTGGTTCAGCTGAAAGGAGAAGGGGAAGACCGAAGGGGAAAAAGCCTCCTAGTTATAGAGAGTTAGAAGATGAAAATGGAGATTCCTCTGAAGCAAGTTCTGAAGAAAGAAACGGATATTCTGCTCATGAAGAAGAAGGGGAAATAGGAGAATTTGAAGATGACGGTTATAGTGGGGCTGATGGTGCACAACCCATTGACAAAGATCAATTGGATGAGGACGGGCCACTTTGTGACAGTGGATATGAATTTCCTCGGTCTTCTGAAAATACTAGAAATAATCATATGGTTGAAGAAGCTGGTACTTCAGGATCATCCTCTGACAGTCAAAGATTGATTCAGACTGTATCTCCTTCAGTTTCTTCTCAGAAATTTGGTTTCCTTTCTGCTTTGGATGCGAGGCCAAGCTCAGTATCAAAAAGGATGACAGATGAACTAGAGGAAGGGGAAATTGCTGTATCTGGTGATTCTCACATGGATCACCAACAATCTGGAAGTTGGATTCATGATCGTGATGAAGGTGAAGATGAACAAGTTTTGCAACCCAAGATTAAGCGTAAACGTAGTCTTCGTGTTCGACCCCGTAATGCCATGGAAAGACCTGAGGAGAAGTCAGGCAGTGAGATGGCATCTCTTCAACGCAGAGAATCGTCTCCTTTGACTGTCCAAGCAGACCACAGGTATCTAGGGCAATCAAGGACTGATTCAGAACCAAAATCATTTGTTGACTCTAATTCTAGCAGGCACGATCAAATTGAGTCAACATCAAAAAATAAGCGAACTTTACCTTCAAGGAGGGTAGCCAATACATCCAAATTACATGGCTCACCTAAGCCTAGTCGATTGAATTGCATTTCTGCTCCATCAGAGGATGGTGAACACTCCAGAGAAAATTGGGAGCAGAAGCCTATAAATTCAAGTGGGTCTTCAGCTTTTGGTGCTAAAATGCCAGAAATCATCCAGAGAAGGTGCAAGAATGTGATTAACAAACTTCAAAGGAGAATAGATAAGGAAGGTCATCAAATTGTACCTCTGGTAACAGATTTGTGGAAGAGGATCGAAAATTCTGGATACAGTGGTGGATCTGGGAATAACCTGTTGGATTTACGAAAGATTGACCAGCGAATTGATAGATTAGAGTATAATGGAGTAATGGAGCTTGTGTTCGATGTGCAGTTCATGTTGAAGGGTGCAATGCATTTTTATGGGTTCTCATATGAGGTAAGAATTGAAGCAAGGAAGGTGCATGATCTCTTTTTTGACCTCCTGAAAATTGCATTTCCTGATACGGACTTCCGAGAGGCAAGAAGTGGACTTTCTTTCTCTGGTCAAGTTTCTGCCGGTACTGTAACATCGCCAAAGCAAGGAGCAATTAGCCAACTGAAGAGGCACAAACATATAAATGAGGTGGAAACTGATCCATCCCCTTCGCAGAAGCCACTGCAACGTGGATTCCCTCCTGGGAATGAAAACACAAGGACCAAAGGCCATGTCTCTCAGAAGGAATCGAGAGTAGCGAGTGGTGGTGGGAGCGGCAGAGAGCAACTTCAGCAGGATGATTCTCCAGTGCTTGCTCATCCAGGTGAACTGGTGGTGTGCAAGAAGAGAAGAAATGAGAGGGAGAAATCATTGGTGAAGACTAGGACTGGCTCAGCTGGCCCTGTTTCACCACCAAGCATGGGTCCTGCTATAAGAAGTCCGGGGCCTGGTTCAGTCTCCAAGGCCGCCCACACGCAAGGATGGTCCGGCCAGCCAGGTCAACAACCGAATGGGTCTGGTGGGTCAGTTGGCTGGGCAAACCCTGTAAAGCGATTGAGAACGGATTCCGGCAAGAGAAGACCAAGCCATCTATAA 6681 0.4402 MQSAGGGGGGPGRNPGVGPVGRATSTSSAASPSSSSSSHLGLDSLQQQQQIAGSRQSLQQQLLRKPEGNEAFLAYQAGLQGVFGSNNFSSPATMQLSQQSRKFIDLAQHGSSQEAQLRGQGVEQQMLNPVQQAYMQYALQAQQKSALAMQSQQQTKMGMLGSSSVKDQEMRMGNLKMQDLMPMQAVNQAQASTSRNSSEHFTRGEKQIEQGQQQVPEQKGEGKPSTQGPAVGHLMPGNMIRPAQAPATQQGIQNVANNQIPVSAQLHAMQAWAHERNIDLSHPGNANLMAQLIPLMQSRMVSQQRANDNSVGAQSSPVPVSKQQVTSAAVVSENSAHANSSSDVSGQSGSAKARQTVPPSHFGPPTNVGIASNANDMSVQQFSVHGRESQSHLRPPVVGNGMPPMHPQQSSGNVNPGAEPPQMQYIRQLKQPSPQSAGPSNEGGSGNHVKSQMVPAQMPQHLGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLELQVQQLSHPVGEKSQDKSVVNIVPESPVQIDSTAKDSQSFPATNGPSSSKQETFARDDKAAVTAVHMQAIPAVTKESMPSLPARKEDQQSIGSSIKPDQENERGINRTTVRNELPLDRGKAIAPQAPVSDAMQIKKPAQVNTVAPSKDLALTRKYHGPLFDFPFFTRKPESFGSSMMINNNNLSLAYDVKDLLFEEGVEVLNKKRTENLKKIEGLLAVNLERKRIRPDLVLKLQIEEKKLRLLNLQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRLELSRQVQASQRALREKQLKSMFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVDRYREMLLEQQTSMPGDAAERYAVLSSFLSQTEEYLHKLGSKITAAKNQQEMEEAARAAATAARLQGLSEEEVRAAAACAGEEVMIRNHFMEMNAPKDSSSVRKYYSLAHAVNEKVISQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGGKDQRSKLFSQVVSAMKFNVLVTTYEFIMYDRSKLSKIDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQREGPTQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAFQSSIYDWVKSTGTLRLDPEDEKRRVEKNPVYQAKQYKTLNNRCMELRKTCNHPLLNYPYFTDLSKDFLIRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNGQDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVDKIPSHQKEDELRSGGIVDLEDELAGKDRYIGTIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSKEEVVLFDQMDEELDWTEEMTQHDQVPKWLRASTKEVNATIAALSKKPSKNILWGSNTGVESSEIGSAERRRGRPKGKKPPSYRELEDENGDSSEASSEERNGYSAHEEEGEIGEFEDDGYSGADGAQPIDKDQLDEDGPLCDSGYEFPRSSENTRNNHMVEEAGTSGSSSDSQRLIQTVSPSVSSQKFGFLSALDARPSSVSKRMTDELEEGEIAVSGDSHMDHQQSGSWIHDRDEGEDEQVLQPKIKRKRSLRVRPRNAMERPEEKSGSEMASLQRRESSPLTVQADHRYLGQSRTDSEPKSFVDSNSSRHDQIESTSKNKRTLPSRRVANTSKLHGSPKPSRLNCISAPSEDGEHSRENWEQKPINSSGSSAFGAKMPEIIQRRCKNVINKLQRRIDKEGHQIVPLVTDLWKRIENSGYSGGSGNNLLDLRKIDQRIDRLEYNGVMELVFDVQFMLKGAMHFYGFSYEVRIEARKVHDLFFDLLKIAFPDTDFREARSGLSFSGQVSAGTVTSPKQGAISQLKRHKHINEVETDPSPSQKPLQRGFPPGNENTRTKGHVSQKESRVASGGGSGREQLQQDDSPVLAHPGELVVCKKRRNEREKSLVKTRTGSAGPVSPPSMGPAIRSPGPGSVSKAAHTQGWSGQPGQQPNGSGGSVGWANPVKRLRTDSGKRRPSHL 2226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00500 2226 Gene3D - 1922 2034 IPR036427 GO:0005515
Bach14g00500 2226 FunFam ATP-dependent helicase BRM 979 1227 - -
Bach14g00500 2226 Pfam QLQ 464 497 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bach14g00500 2226 FunFam ATP-dependent helicase BRM 1228 1438 - -
Bach14g00500 2226 Coils Coil 738 762 - -
Bach14g00500 2226 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1319 1496 IPR001650 -
Bach14g00500 2226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1222 1558 IPR027417 -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 2181 2204 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 1851 1869 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 1772 1793 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 426 451 - -
Bach14g00500 2226 Pfam Helicase conserved C-terminal domain 1318 1429 IPR001650 -
Bach14g00500 2226 SMART helicmild6 1345 1429 IPR001650 -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 586 602 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 2082 2103 - -
Bach14g00500 2226 SMART bromo_6 1926 2037 IPR001487 GO:0005515
Bach14g00500 2226 ProSiteProfiles QLQ domain profile. 463 499 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bach14g00500 2226 MobiDBLite consensus disorder prediction 2139 2155 - -
Bach14g00500 2226 Pfam SNF2-related domain 991 1295 IPR000330 GO:0005524|GO:0140658
Bach14g00500 2226 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1000 1165 IPR014001 -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 2113 2127 - -
Bach14g00500 2226 PANTHER SNF2/RAD54 HELICASE FAMILY 729 1769 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 20 60 - -
Bach14g00500 2226 Gene3D - 979 1227 IPR038718 -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 1747 1764 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 2078 2226 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 1596 1921 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 1803 1819 - -
Bach14g00500 2226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 964 1218 IPR027417 -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 530 563 - -
Bach14g00500 2226 SUPERFAMILY Bromodomain 1976 2035 IPR036427 GO:0005515
Bach14g00500 2226 MobiDBLite consensus disorder prediction 301 451 - -
Bach14g00500 2226 CDD SF2_C_SNF 1314 1439 - -
Bach14g00500 2226 SMART ultradead3 984 1173 IPR014001 -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 188 233 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 404 418 - -
Bach14g00500 2226 FunFam Brahma1 1924 2047 - -
Bach14g00500 2226 Gene3D - 1228 1438 IPR027417 -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 1693 1735 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 1 60 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 1870 1886 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 1820 1850 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 301 388 - -
Bach14g00500 2226 SMART QLQ_2 462 499 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bach14g00500 2226 MobiDBLite consensus disorder prediction 207 221 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 530 554 - -
Bach14g00500 2226 MobiDBLite consensus disorder prediction 576 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00500 Bach-Chr14 3776072 3787530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00500 1009 1454 RAD5 or RAD16-like Gene Family AT1G02670 25.670 3.10e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach14g00500 SNF2_N 1.5e-65 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00500 K11647 - gmx:100807104 3377.8