Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00488 ATGTCTGTGGGGAGATGGCTTGGCTTGCTCGTCTGTGTCTCTTCAACAAACAGCACCATCGGTTCCACGCGGGGGCCACTGGTGGAGCTCGGCGTCCCTTCTTCGCTTGACATCCCCTTCAGCCTCGCCTCCATCTCCTTCCCCCACGTTCTCGTCGTTGTCGAGCTTGAGCTTCCCGTTCTCCAGTGGCGGAGTTTTAGCTGGGTTGGTGGGTGGTGGACGTCGTCGACCAGAGACGTGAGGTTGCGGTCGCTGGAGTTTTTGGTTGTTGCGGTGGGTGATGGGTTGAGGGGTATATGTGACAAAAGGATGGATTCCAAGGAAAAAAATGAGATTTCCATCCGGTCGTCTATTCTAAAATGTCTTCGAGGTTCTGTCAACGGATCTTTGAACATGGGGTTGATTCAACCATCTCTCCGTAATATAAAGTTTGCAATATATGCTAATCATATTCATGCAACATTGCCTAGTGATTCTCGGGATCGTGCTTATTTCAAAGGAGAGTTACAGTTACCTGAAATTTTTGCGAATAATGAGTTCAGGAATTTGACTTCTGAATCTCATGTTAAAAGTGTCCTCTTAAATACTAAATCCAATGTTTCATTTTCTCCTAAATTTTCTAGTTTCTGTTACCCGAATGCACTTCCCTTTGCCTCAATGACCCATGTACTCAGCTATCGATCATATTCATCCTGGCTGGGTGGGAAAGGAAGTAGGGATGGGGACACAGAAGTTCCTACAGGTTCTGCTGCAAGCGACGTAAGTCCCAGCAATGATTCTGTTAATGCAGATGATTGGGTTGATAAGGTTAAAGATGCTTGGCATAATGCAGTGGAGACAGCAACATATGCTGGGCAAAAGGTTAAAGAAGCCTCTGATCAGATGACTCCGCATGTGGAACAGTTGCTTGAGTCGCATCCTTACCTTAAAAATGTGGTAGTTCCGGTTGGTGGAGTGTTAACATCTACTATAATAGCTTGGATTGTGATGCCTCGAATTTTGAGGAAATTCCACAAATATGCAATGCAAGGTCCTGCTGTCCTTACTGGAAGTATATTTGGGGCAGAAGTTCCCTATGAGAAAAGCTTTTGGGGTGCTTTGGAGGGTCCAGTGCGATATTTAGTTACCTTCATGGCATTCTCACAAATTGGTTCCATGGTAGCTCCAACAACAATAACCTCACAATACCTTGTACCAGCTTGGAGGGGTGCATTGATTGTTTCGCTTGAAAAATTGCTTGCTCTTGACAAAATCTCATCCGTTGATATATTCTCCAATCAGAGGGTTGATCAGGAAAAATTGCTTGCTCCTGACAAAATCTCATCTGGTGGCATATTCTCCAATCAGAGTTTACTCGGGGTTGATCAGGAAAAATTGCTTGCTCCTGACAAAATCTCATCTGGTGGCATATTCTCCAATCAGAGGGTTGATCAGGAAAAATTGCTGGCTCCTGACAAAATCTCATCTGGTGGCATATTCTCCAATCAGAGTTTACTCGGGGTTGATCAGGAAAAATTGCTTGCTCCTGACAAAATCTCATCTGGTGGCATATTCTCCAATCAGAGGGTTGATCAGGAAAAATTGCTTGCTCCTGACAAAATCTCATCTGGTGGCATATTCTCCAATCAGAGGGTTGATCAGGAAAAATTGCTGGCTCCTGACAAAATCTCATCTGGTGGCATATTCTCCAATCAGAGTTTACTCGGGGTTGATCAAGAAAAATTGCTTGCTCTTGACAAAATCTCATCTGGTGGCATATTCTCCAATCAGAGTTTACTCGGGGTTGATCGGGAAAAATTGCTTGCTCTTGACAAAATCTCATCTGTTGGTCTATTTATGATTGGTATAATGGCTATAGCAAAGGCTTGCGGTGTGCCCGTGCAATCTATTGTAACTGTTGGTGGCATAGGAGGAGTGACTACTGCTTTCGCTGCTAGAGACATCCTTGGCAATATTTTCAGTGGTTTATCTATGCAATTTACGAAGCCCTTTTCTGTTGGAGATACAATTGAAGCTGGCTCAATAGAGGGACAAGTGGTGGAAATGGGACTTACTACCACATCCTTGCTGAATGCCGAGAAGTTCCCAGTTATAGTGCCAAACTCGTTCTTTTCTAGCCAGGTTATCATGAATAAGTCCCGTGCTGTGTGTCGTGCAATCACCTCCAAAATTCCTCTGCAAATTAAGGACGTTAATAAGATTCCGCAGATATCAGATGATATAAAGAGCATGTTGCAGTCAAATGCAAAGGTTTTCTTAGGAAAAGAAGTTCCTTACTGTTTCTTGTCATGCATAGAAAGTTCATATGCAGAATTTACTCTTGGATACAACCTCAAATACATGCGCAAAGATGAGTTGTACTCTGCAGAGCAAGAGATTCTCCTGCAGGCAGTCCAGATTATTCAGAACCACGGTGCTGCTCTCGGAAGTACCTGGCGAGATTCTACCACCAGTGACAGTGACAGTGACAGCTGA 2475 0.4404 MSVGRWLGLLVCVSSTNSTIGSTRGPLVELGVPSSLDIPFSLASISFPHVLVVVELELPVLQWRSFSWVGGWWTSSTRDVRLRSLEFLVVAVGDGLRGICDKRMDSKEKNEISIRSSILKCLRGSVNGSLNMGLIQPSLRNIKFAIYANHIHATLPSDSRDRAYFKGELQLPEIFANNEFRNLTSESHVKSVLLNTKSNVSFSPKFSSFCYPNALPFASMTHVLSYRSYSSWLGGKGSRDGDTEVPTGSAASDVSPSNDSVNADDWVDKVKDAWHNAVETATYAGQKVKEASDQMTPHVEQLLESHPYLKNVVVPVGGVLTSTIIAWIVMPRILRKFHKYAMQGPAVLTGSIFGAEVPYEKSFWGALEGPVRYLVTFMAFSQIGSMVAPTTITSQYLVPAWRGALIVSLEKLLALDKISSVDIFSNQRVDQEKLLAPDKISSGGIFSNQSLLGVDQEKLLAPDKISSGGIFSNQRVDQEKLLAPDKISSGGIFSNQSLLGVDQEKLLAPDKISSGGIFSNQRVDQEKLLAPDKISSGGIFSNQRVDQEKLLAPDKISSGGIFSNQSLLGVDQEKLLALDKISSGGIFSNQSLLGVDREKLLALDKISSVGLFMIGIMAIAKACGVPVQSIVTVGGIGGVTTAFAARDILGNIFSGLSMQFTKPFSVGDTIEAGSIEGQVVEMGLTTTSLLNAEKFPVIVPNSFFSSQVIMNKSRAVCRAITSKIPLQIKDVNKIPQISDDIKSMLQSNAKVFLGKEVPYCFLSCIESSYAEFTLGYNLKYMRKDELYSAEQEILLQAVQIIQNHGAALGSTWRDSTTSDSDSDS 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00488 824 MobiDBLite consensus disorder prediction 237 260 - -
Bach14g00488 824 Gene3D - 576 662 - -
Bach14g00488 824 Gene3D - 663 711 IPR023408 -
Bach14g00488 824 Pfam Mechanosensitive ion channel 605 806 IPR006685 GO:0016020|GO:0055085
Bach14g00488 824 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 594 646 IPR011014 GO:0016020
Bach14g00488 824 SUPERFAMILY Sm-like ribonucleoproteins 647 712 IPR010920 -
Bach14g00488 824 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 587 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00488 Bach-Chr14 3644603 3663147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00488 586 816 Mechanosensitive Ion Channel Family AT4G00290 70.563 8.84e-110 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00488 K22047 - gmx:100814954 360.147