Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00487 ATGGCTGCATTGAGGTCGTCTATTCTAAAATGTCTTCGAGGTTCTGTCAATGGATCTTTGAACTTGGGGTTGATTCAACCATCTCTCCGTAATATAAAGTTTGCAAGATATGCTAATCATATTCATGTAACATTGCCCAGTGATTCTCGGGATCGTGCTTATTTCAAAGGAGAGTTACAGTTACCTGAAATTTTTGCGAATAATGAGTTCAGGAATTTGACTTCTGAGTCTCCTGTTAAAAGTGTCCTCTTCAATACCAAATCCAATGTTTCATTTTCTCCTAAATTTTCTAGTTTTTGTTTCCGGAATGCACTTCCCTTTGCCTCAATGACCCATGTACTCAGCTATCGATCATATTCATCCTGGCTGGGTGGGAAAGGAAGTAGGGATGGGGACACAGAAACTCCTACAGGTTCTGGTGCAAGCGACGTAAGTCCCAGCAATGATTCTGTTAATGCAGATGATTGGGTTGATAAGGTTAAAGATACTTGGCATAATGCAGTGGAGACAGCAACATATGCTGGGCAAAAGGTTAAAGAAGCCTCTGATCAGATGACTCCGCATGTGGAACAGTTGCTTGAGTCGCATCCTTACCTTAAAAATGTGGTAGTTCCAGTTGGTGGAATGTTAACATGTACTATAATGGCTTGGATTGTGATGCCTCGAATTTTGAGGAAATTTCACAAATATGCAATGCAAGGTCCTGCTGTCCTTACTGGAAATGTATTTGGGGTGGAAGTTCCCTATGAGAAAAGCTTTTGGGGTGCTTTGGAGGATCCAGTGCGATATTTAGTTACCTTCATGGCATTCTCACAAATTGGTTCCATGGTAGCTCCAACAACAATAACCTCACAATACCTTGTACCAGCTTGGAGGGGTGCATTGATTGTTTCGCTTGTATGGTTTTTGTATCGATGGAAAACAAATGTTTTTTCACGTATATTCTCCAATCAGAGTTTACTCGGGGTTGATCGGGAAAAATTGCTTGCTCTTGACAAAATCTCATCTGTTGGTCTATTTATGATTGGTATAATGGCTTTAGCAGAGGCTTGTGGTGTGGCCGTGCAATCTATTGTAACTGTTGGTGGCATAGGAGGAGTGGCTACTGCTTTCGCTGCTAGAGACATCCTTGGCAATATTTTCAGTGGTTTATCTATGCAATTTACGAAGCCCTTTTCCATTGGAGATACAATTAAAGCTGGCTCAATTGAGGGACAAGTGGTGGAAATGGGACTTACTACCACATCCTTGCTGAATGCCGAGAAGTTCCCAGTTATAGTGCCAAACTCGTTCTTTTCTAGCCAGGTTATCATGAATAAGTCCCGTGCTGTGTGCCGTGCAATCACCTCCAAAATTCCTCTGCAAATTAAGGACGTTAATAAGATTCCGCAGATATCAGATGATATAAAGAGCATGTTGCAGTCAAATGCAAAGGTTTTCTTAGGAAAAGAAGTTCCTTACTGTTTCTTGTCACGCATAGAAAGTTCATATGCAGAATTTACTCTTGGATACAACCTCAAATACATGCGCAAAGATGAGTTGTACTCTGCAGAGCAAGAGATTCTCCTGCAGGCAGTCCAGATTATTCAGAACCACGGTGCTGCTCTCGGAAGTACCGGGCGAGATTCTACCACCAGTGACTTTGACAGCTGA 1653 0.4192 MAALRSSILKCLRGSVNGSLNLGLIQPSLRNIKFARYANHIHVTLPSDSRDRAYFKGELQLPEIFANNEFRNLTSESPVKSVLFNTKSNVSFSPKFSSFCFRNALPFASMTHVLSYRSYSSWLGGKGSRDGDTETPTGSGASDVSPSNDSVNADDWVDKVKDTWHNAVETATYAGQKVKEASDQMTPHVEQLLESHPYLKNVVVPVGGMLTCTIMAWIVMPRILRKFHKYAMQGPAVLTGNVFGVEVPYEKSFWGALEDPVRYLVTFMAFSQIGSMVAPTTITSQYLVPAWRGALIVSLVWFLYRWKTNVFSRIFSNQSLLGVDREKLLALDKISSVGLFMIGIMALAEACGVAVQSIVTVGGIGGVATAFAARDILGNIFSGLSMQFTKPFSIGDTIKAGSIEGQVVEMGLTTTSLLNAEKFPVIVPNSFFSSQVIMNKSRAVCRAITSKIPLQIKDVNKIPQISDDIKSMLQSNAKVFLGKEVPYCFLSRIESSYAEFTLGYNLKYMRKDELYSAEQEILLQAVQIIQNHGAALGSTGRDSTTSDFDS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00487 550 MobiDBLite consensus disorder prediction 127 150 - -
Bach14g00487 550 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 289 374 IPR011014 GO:0016020
Bach14g00487 550 SUPERFAMILY Sm-like ribonucleoproteins 375 440 IPR010920 -
Bach14g00487 550 Pfam Mechanosensitive ion channel 333 534 IPR006685 GO:0016020|GO:0055085
Bach14g00487 550 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 156 539 - -
Bach14g00487 550 Gene3D - 290 390 - -
Bach14g00487 550 MobiDBLite consensus disorder prediction 132 150 - -
Bach14g00487 550 Gene3D - 391 439 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00487 Bach-Chr14 3635418 3638896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00487 93 544 Mechanosensitive Ion Channel Family AT4G00290 61.354 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00487 K22047 - gmx:100789047 726.472