Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00428 ATGGAGGAGGTGGATTCCGACGATTATGGGATTGATGTGATTCCGAAGAAACGGAGGGTGAATGGGTTTTACTCTCTTGGTATGCCTGGTGAGGCTGAAGATTTCAGCAGCGGTTCAGGGTCTCAGTGCAGTGAAGGGTCGTGCTGGGGTAATGGTGAGGTCCAGTCAAAATCAAATTCAATACGATTGAATAGTAGGACAGCACTACAACGAGGTTCAGAAGGGTTTCGGCCTCCATTGTTAAGGTCCTCTCGGGGTCGTCCCCAGATGCTTCCGTCGAGGTTCAATGATTCAGTTATTGATATATGGAAGAAAGAAGACATTAAAGTGGAGGACACAGACTCCAGCTTCGAAGATGATAATATTTTTGTAGATGATAGAGCAGGAATTAGTGGATTGGGATTTGTGAAAAAGGAAAAGAGAGATGATAACTATAGCTTCAAAAGTTCGAAGTGTTGCCAATATCCAGAACTGGATGAAGAACCAGAAATGGATGGCTTCAGTTTCAACAATGTTGATAACAAAAAGCATGCAAATTCATTTAGTAGCATTAGGAACACAGTGGACGGGGATTGTTCTTTGTTAGTAAAAACTGAGAGTTATGCTTCTGGACTTAGTTTTGAGAGTGCAGACCAAAAGCATAGTAGAAATGCTGAGAAGAGGAAGGACATCTACAAACCAGAGGAATTTGCTCTGGGTGATATAGTTTGGGCAAAATGTGGGAAGAGATATCCGGCTTGGCCTGCTATAGTGATTGATCCCATCTTGCAAGCTCCTAAAGCAGTCCTGAGCTGTTGCATTCCTGGTGCAATTTGCGTAATGTTTTTTGGGTATTCAAGGAATGGAAAGCAAAGGGACTACGCATGGGTGAAGCAAGGAATGATATTCCCCTTCATGGAATTCATGGGCAGATTCCAGGGGCAGACCCGATTGTACAAGAGCAAGCCAAGTGACTTTCAGATGGCACTGGAGGAGGCGTTGTTGGCAGAAGAAGGTTTTCTGGACTCAAACATGGGAACCGAGCAAATTGCTGATATTGAAGCACATCCCAGTGGATATATAGAGGCTACCAATTCATATGTTGATCCGGAATATTACTCCCAGGATCAGGTTAATTATCATAGGGATTCAAGACCTTGTACTGGCTGTGGTTTAATTTTACCATGCAAAAGCATGAAGAAGATGAAAGATTCAAGATGTGAAACTCAACTTTATTGTAAACATTGTGCAAAGTTACGAAAATCAAAACAATATTGTGGCATCTGCAATAAAATTTGGCACCATTCAGATGGTGGGAATTGGGTATGCTGTGATGGTTGTAATGTTTGGGTGCATGCTGAGTGTGATAAAATATCCGGCAAACTGTTCAAGGATCTGGAAAATAAAGATTACTATTGTCCAGATTGCAAGCCAAAATTCAACTCGAAGTTTCAAGCCTCACAATCATTCAAGTCAAAAATCAAATCAATAGAGAATAACCAAAAAACTGAGATGCCTGACAAGATAACAGTGGTGTGCAATGGCATGGAAGGATTTTATATTCCAAAACTTCATTTAGTTTTGTGCAAGTGTGGTTCATGTGGGTCAAGGAAGCAGACACTGAGTGAATGGGAAAGGCATACAGGCTGCAAAGCTAAAAAATGGAAATATAGTGTGAAAGTAAAGAGTACAATGCTACCTTTGGAAAAATGGATCTCTGAGCACAATACACAAGGTGGTGTTTCCATGCAATTAGATCAGCAGCAGGTACTTGCCTTTCTGCAAGAGAAGTATGAGCCAGTTTATGCAAAATGGACAACAGAAAGATGTGCAGTTTGTAGATGGGTTGAAGATTGGGATGATAACAAAATTATTATCTGCAACAGGTGCCAAATAGCAGTCCACCAAGAATGCTATGGGGCCAAGAATGTTCAGGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACTCCTGATGTTGAGAGAGAATGTTGCCTCTGCCCTGTAAAAGGTGGTGCACTAAAGCCAACTGATGTCGAGATGCTGTGGGTTCATGTCACGTGTGCTTGGTTCCGGCCTGAAGTTGGTTTCTCAAACCATGAAATGATGGAACCTGCCTTCGGAATCTTGAAAATTCCTCCAACTTCCTTTTTGAAGACTTGTGTTATCTGTAATCAAGCTCATGGTTCCTGCACCAGTTGTTGCAAGTGTGCAACTTATTTCCATGTGATGTGCGCATCAAGAGCTGGGTATAGCATGGAATTGCATTCCATGGAGAAGAATGGGAGTCAGGTTATAAAGAAGCTCATATATTGTGCAATTCACAGGGTCCCGAACGCAGATTCAGTACTGGTTGTACATACTGCCCTGGGGGTTTTCTCACCCAGAACTTCACTGCAAAATCAAAAGGGATGCTTCAGGGGTTCTAGGTTGGTTTCAGTAAAGAACGTAGAACTTCTTGAATCTTCAACCTCTGAGACTAATGTGGTTGAGCCCCTCTCTGCTGCAAGATGTCGTGTATACGTTAGTTCTCCTAAAAAGAAGGCTAATGTGCCCATAATCCATTTATTGACGGGACCAAGCCATCATTCTTTAAGTACAGTAACTCAATTTAACAGCTATGAGGATGCTGGAGACTCTAAAATATTTACTTCGTTCAAGGAAAGACTTCGCTATATACAGAAAACTGAAAATCATCGAGTTTGCTTTGGAAAATCGGGAATACATGGATGGGGCCTCTTTGCACGTAGAAATATACAAGAAGGAGAGATGGTTACTGAGTATCGTGGTGAACAGGTGAGGCGCAGTGTTGCTGATATGAGGGAGGCTAAATATCGTTTGGAAGACAAAGATTGTTACCTGTTTAAGATCGGTGAAGAAGTGGTAATTGATGCAACACGTAAGGGCAACATTGCACGCTTGATAAACCATTCTTGCATGCCAAACTGTTACGCGAGAATCATGAGTATGGGTGATGACGAGAGCTGTATTGTTCTAATTGCCAAGACCAATGTTTCTGCTGGTGAAGAATTAACGTATGATTACTTGTTTGATCCAGATGAGCGAGATGAACTGAAAGTTCCCTGCCTATTTGCCGTTTTTGAATCTGAAGAGGGAATCAGTGAAAAGAGTGCTTCTGTTGTTCGAATCTCGAGCAAAGTCCTACCTCCTCAACGCGTCTATGGTTTCAAGCTGAAGCTCACGAATGACATAACATTTAGAGACAATCTGTATATAGGGGGGAAGTTTGAATGGCTTCTGACTTCAGGCGATTCCGAAGACCGGCATGTTTTGCACGCATCAATATCATGGATAGGAGAGGCGTTGACCAGACAAGCTAGTGTTAGGCGAGAGCCGGCAACTGCCGGGACCCAACGACAGCAGTTGCTCGATATTCCTGTCAGATTACAATACCAAAGAGACGGACTGATTCCAGAGTGCAAACACTGTTTCCATGCTGAATGCTTAGACAAGTGGCTTCGCATGACCAGTTCACGACCAGTTTGCCGTAACATCCCATCCCATTCTCCCCTTTCTCTTCGTGTTACGGCATCCAGCAATGATTGA 3546 0.4264 MEEVDSDDYGIDVIPKKRRVNGFYSLGMPGEAEDFSSGSGSQCSEGSCWGNGEVQSKSNSIRLNSRTALQRGSEGFRPPLLRSSRGRPQMLPSRFNDSVIDIWKKEDIKVEDTDSSFEDDNIFVDDRAGISGLGFVKKEKRDDNYSFKSSKCCQYPELDEEPEMDGFSFNNVDNKKHANSFSSIRNTVDGDCSLLVKTESYASGLSFESADQKHSRNAEKRKDIYKPEEFALGDIVWAKCGKRYPAWPAIVIDPILQAPKAVLSCCIPGAICVMFFGYSRNGKQRDYAWVKQGMIFPFMEFMGRFQGQTRLYKSKPSDFQMALEEALLAEEGFLDSNMGTEQIADIEAHPSGYIEATNSYVDPEYYSQDQVNYHRDSRPCTGCGLILPCKSMKKMKDSRCETQLYCKHCAKLRKSKQYCGICNKIWHHSDGGNWVCCDGCNVWVHAECDKISGKLFKDLENKDYYCPDCKPKFNSKFQASQSFKSKIKSIENNQKTEMPDKITVVCNGMEGFYIPKLHLVLCKCGSCGSRKQTLSEWERHTGCKAKKWKYSVKVKSTMLPLEKWISEHNTQGGVSMQLDQQQVLAFLQEKYEPVYAKWTTERCAVCRWVEDWDDNKIIICNRCQIAVHQECYGAKNVQDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPEVGFSNHEMMEPAFGILKIPPTSFLKTCVICNQAHGSCTSCCKCATYFHVMCASRAGYSMELHSMEKNGSQVIKKLIYCAIHRVPNADSVLVVHTALGVFSPRTSLQNQKGCFRGSRLVSVKNVELLESSTSETNVVEPLSAARCRVYVSSPKKKANVPIIHLLTGPSHHSLSTVTQFNSYEDAGDSKIFTSFKERLRYIQKTENHRVCFGKSGIHGWGLFARRNIQEGEMVTEYRGEQVRRSVADMREAKYRLEDKDCYLFKIGEEVVIDATRKGNIARLINHSCMPNCYARIMSMGDDESCIVLIAKTNVSAGEELTYDYLFDPDERDELKVPCLFAVFESEEGISEKSASVVRISSKVLPPQRVYGFKLKLTNDITFRDNLYIGGKFEWLLTSGDSEDRHVLHASISWIGEALTRQASVRREPATAGTQRQQLLDIPVRLQYQRDGLIPECKHCFHAECLDKWLRMTSSRPVCRNIPSHSPLSLRVTASSND 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00428 1181 Pfam SET domain 903 1008 IPR001214 GO:0005515
Bach14g00428 1181 SUPERFAMILY FYVE/PHD zinc finger 601 665 IPR011011 -
Bach14g00428 1181 ProSiteProfiles PWWP domain profile. 232 301 IPR000313 -
Bach14g00428 1181 CDD PHD_TCF19_like 419 469 - -
Bach14g00428 1181 FunFam Histone-lysine N-methyltransferase 867 1030 - -
Bach14g00428 1181 SUPERFAMILY FYVE/PHD zinc finger 416 474 IPR011011 -
Bach14g00428 1181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1116 1165 IPR013083 -
Bach14g00428 1181 ProSitePatterns Zinc finger PHD-type signature. 603 648 IPR019786 -
Bach14g00428 1181 Gene3D SET domain 854 1017 IPR046341 -
Bach14g00428 1181 Gene3D - 218 335 - -
Bach14g00428 1181 ProSiteProfiles Zinc finger PHD-type profile. 416 472 IPR019787 -
Bach14g00428 1181 SMART PHD_3 713 769 IPR001965 -
Bach14g00428 1181 SMART PHD_3 602 649 IPR001965 -
Bach14g00428 1181 SMART PHD_3 418 470 IPR001965 -
Bach14g00428 1181 CDD SET_SETD1-like 881 1023 - -
Bach14g00428 1181 Pfam PHD-finger 615 649 - -
Bach14g00428 1181 PANTHER PHD FINGER PROTEINS 39 1011 - -
Bach14g00428 1181 SMART set_7 892 1015 IPR001214 GO:0005515
Bach14g00428 1181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 411 476 IPR013083 -
Bach14g00428 1181 ProSiteProfiles Zinc finger PHD-type profile. 600 651 IPR019787 -
Bach14g00428 1181 CDD PHD_ATX3_4_5_like 602 648 IPR042011 -
Bach14g00428 1181 Pfam PHD-zinc-finger like domain 656 768 - -
Bach14g00428 1181 SMART PWWP_4 230 299 IPR000313 -
Bach14g00428 1181 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 16 1039 IPR025780 -
Bach14g00428 1181 Pfam PWWP domain 233 328 IPR000313 -
Bach14g00428 1181 ProSiteProfiles SET domain profile. 892 1009 IPR001214 GO:0005515
Bach14g00428 1181 FunFam Histone-lysine N-methyltransferase 652 771 - -
Bach14g00428 1181 Pfam PHD-finger 418 472 IPR019787 -
Bach14g00428 1181 SUPERFAMILY RING/U-box 1137 1165 - -
Bach14g00428 1181 SUPERFAMILY SET domain 883 1022 IPR046341 -
Bach14g00428 1181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 594 651 IPR013083 -
Bach14g00428 1181 SUPERFAMILY Tudor/PWWP/MBT 223 362 - -
Bach14g00428 1181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 652 770 IPR013083 -
Bach14g00428 1181 ProSiteProfiles Extended PHD (ePHD) domain profile. 654 769 IPR034732 -
Bach14g00428 1181 CDD PWWP_AtATX3-like 233 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00428 Bach-Chr14 3079091 3088544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00428 374 443 EF-hand Containing Proteins AT5G28340 60.000 1.07e-21 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach14g00428 zf-HC5HC2H_2 1.1e-27 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00428 - - qsa:O6P43_027371 1488.01