Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00399 ATGGTACCAGATGTACTTCTAGGTGGTGTTAGCGGTGCTACTACAGAAACTATTACTCAGATCATAGAATTTATGGGCGAGTTTGTAAACAATGCTGCCGATGTTCTTGTAAAGAAGGATAGTTTTAAGGAACTTGCAACTTATCTGGCGAGAATTGTACCCATCTTGAAGGAATTGAGGGAGATAACTGTGAGTAGCTCGGAGACCTTTTGCCAAGCCATTGAGATTTTGAATCGTGAAATCAGAGATGCAAACCAACTGAGATTAGAATGCAGCAAGAGAAACAAGGTCTATCTCCTATTGAATTGTAGGCCAATTGTCAAGCGTTTAAAGAATGCCACAAGCGAGATCTGCCGGGCACTTGGCCTTCTTCCTTTGGCCACATCAAGTCTTTCTTCTGGAATAATTGAACAAATTGAAAATCTGTGTGACAATATGCAGAAAGCTGAGTTTAAGGCAGCCATAACAGAAGAAGAAATATTGGAGAAAATCGAGTTAGGGATACAGGAAAAGAATGTTGATCGCTCCTATGCCAATAATTTGATGATTCTCATTGCAGAGGCGGTAGGGATTACAAAAGAGAATTCTGCAATGAAGAGGGAACTTGAAGAATTCAAAAGTGAGATTGAAAATGCCCGCCTTAGAAAGGACCTGGCTGAAGCTATGCAAATGGATCAAATTATTGCTTTGTTAGAAATGGCTGATGCAGCCTCATCACCAAGAGAAAAGGAGCTCAAGTACTTTGCCAAACGCAAATCTTTGGGTAGTCAACTATTGGAGCCTCTTCAGTCATTTTATTGCCCCATAACTAACGATGTCATGGTGGACCCTGTAGAAACTTCATCAGGGCAGACATTTGAGAGAAGTGCTATAGAAAAATGGTTTACAGAAGGAAACAAAATGTGCCCTCTAACCGTGACTCCTTTAGACACATCAGTTTTGCGACCAAACAAAACCTTGAAACAGTCAATAGAAGAATGGAAGGATAGAAATACCATGATTTCAATTGTGTCAATGAGAGAAAAACTCCAGTCCGGAGATGACATCGAAGTATTACATTGTCTAGCAACTATACAGGATTTGTGTGAACAGAAGGGCCAGCATAGGGAATGGGTGATACTGGAGAATTACATACCAGTTCTTATCCAAATTCTTGGTGTTAAGAACCATGATATAAGGAATAATGCTCTTGTCATCCTTTGCATGTTGGCGAAGTATAGTGATGATGCTAAGGAAAGAATTGCAAAAGTTGATAATGCAATTGACTCTGTTGTCCATTCTCTTGGGCGTCGTGCATTGGAAAGGAAGTTGGCAGTGGCATTACTGCTGGAATTATCCCAATATGATTTGGTACGAGAATACATTGGAAAGGCTCAAGGTTGCATTTTACTATTGGTGACTATGGCTAGCAGTGATGACAACCAAGCTGCCAGAGATGCCACAGAGCTATTGGATAATCTTTCATACTCTGATCAGAATGTTCAACGGATGGCCAAGGCAAACTATTTCAAGCACTTGTTGCATCGTCTTTCAACAGGACCAGATGATGTGAAAGTGATTATGGCAACAACTCTAGCAGAAATGGAGTTAACCGACCACAATAAAGAGTCCTTGTTCGAAGGTGGTGTGCTGGGTCCTCTTCTTGAATTAGTCTCACATGTGGATATTCAGGTGAAAACAGTTGCCATAAGAGCTCTTCGGAACCTATCCAGTTTAAAGAAAAATGCAATAGAGATGATTCAACAAGGCGCAGTACGCCCATTACTTGACCTTCTCTTCCCTCATGGCTTACCATCCTCAAGTTTACCAGAACATGTGGCGGCCATAATTATGCAACTTGCTGTATCAACCATATCTCAAGATGGAGAGACACCAGTTTTGTTGTTAGAATCTGATGAAGATGTTTTCAAACTCTTCTCTTTGGTTAGAATCACAGCGCCTGATCTGCAACAATATATTTTCCAGACCTTTTATGCCCTGTGTCAGTCCCCCTCATCTTCGTATATCAGGGCAAAGCTAATAGAGTGCTCAGCTGTTCAAGTATTGGTCCCGTTGTGTGAGCATGAGAACCCAAATCTACGAGCAAGTGCAGTAAAGCTGTTTTCTTGCTTGGTAGATAGCATTGATGAAGCGTCCATCCTGGAAATTGTGAATCAGAAATGCGTTGAGACTTTACTCAAGATTCTGAGATCTCCTTTGGATGAAGAGGAAATTGCTTCCGCTATGAGCATAATATGCCATCTTACGAAAACTGTCCAGATCACTCAATGGTTTCTGGATGCTGGTGCACTGCCAGTCATTCATAAGCATATCCAAGAGGGGAAGGAAAAAGATCTCCAGAAGTTAGTAGAGAATGCTGTTGGTGCTTTATGTCGTTTCACAGTTCCTGAGAAATTGGAATGGCAAAGGAGTGCTGCCGAGACAGGGATTATACCACTTTTAGTACAGTTGCTAGAATGTGGAACAACCTTGACAAAACAACGTGCGGCATTGTCTCTTGCTCAGTTTTCAGAGAACTCAGTTAGGCTGAGCAGGCCAATACCAAAACGCAAAGGACTCTGGTGCTTCTCAGCTCCAGGAGGAATTGGCTGCTTGATTCATGGAGGATTCTGTACCACCGAATCATCATTTTGCCTTTTGGAGGCTGATGCAGTGGGACCACTAACAAGGACTCTCGCGGAATCTGACCCTAGAGCTTGTGAGGCTTCTTTAGATGCACTATTGACTTTAATTGAAGGTGAAAGACTACAGAGCGGTAGTAAGGTGCTTAAAGAAGCAAATGCCATACCACTGATGATAAAAATTCTTGGTTCTCCGTCCATTGGATTGCAGGAGAAGTCTCTACGTGCTTTGGAGAGAATTTTCAGGCTTCCGGAGTTCAAACAGATGTATGGAGCATCAGCTCAGATGGCTCTTGTTGATTTAACTCAGCGTGGTAATGGCAGTATGAGATCTTTGGCTGCTAGAATATTGGCTTACTTAAATGTGCTTCATGATCAGTCTTCTTATTTCTAA 3015 0.4189 MVPDVLLGGVSGATTETITQIIEFMGEFVNNAADVLVKKDSFKELATYLARIVPILKELREITVSSSETFCQAIEILNREIRDANQLRLECSKRNKVYLLLNCRPIVKRLKNATSEICRALGLLPLATSSLSSGIIEQIENLCDNMQKAEFKAAITEEEILEKIELGIQEKNVDRSYANNLMILIAEAVGITKENSAMKRELEEFKSEIENARLRKDLAEAMQMDQIIALLEMADAASSPREKELKYFAKRKSLGSQLLEPLQSFYCPITNDVMVDPVETSSGQTFERSAIEKWFTEGNKMCPLTVTPLDTSVLRPNKTLKQSIEEWKDRNTMISIVSMREKLQSGDDIEVLHCLATIQDLCEQKGQHREWVILENYIPVLIQILGVKNHDIRNNALVILCMLAKYSDDAKERIAKVDNAIDSVVHSLGRRALERKLAVALLLELSQYDLVREYIGKAQGCILLLVTMASSDDNQAARDATELLDNLSYSDQNVQRMAKANYFKHLLHRLSTGPDDVKVIMATTLAEMELTDHNKESLFEGGVLGPLLELVSHVDIQVKTVAIRALRNLSSLKKNAIEMIQQGAVRPLLDLLFPHGLPSSSLPEHVAAIIMQLAVSTISQDGETPVLLLESDEDVFKLFSLVRITAPDLQQYIFQTFYALCQSPSSSYIRAKLIECSAVQVLVPLCEHENPNLRASAVKLFSCLVDSIDEASILEIVNQKCVETLLKILRSPLDEEEIASAMSIICHLTKTVQITQWFLDAGALPVIHKHIQEGKEKDLQKLVENAVGALCRFTVPEKLEWQRSAAETGIIPLLVQLLECGTTLTKQRAALSLAQFSENSVRLSRPIPKRKGLWCFSAPGGIGCLIHGGFCTTESSFCLLEADAVGPLTRTLAESDPRACEASLDALLTLIEGERLQSGSKVLKEANAIPLMIKILGSPSIGLQEKSLRALERIFRLPEFKQMYGASAQMALVDLTQRGNGSMRSLAARILAYLNVLHDQSSYF 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00399 1004 Gene3D - 12 129 IPR036537 GO:0007166
Bach14g00399 1004 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 16 1004 - -
Bach14g00399 1004 Gene3D - 432 628 IPR011989 -
Bach14g00399 1004 SUPERFAMILY RING/U-box 252 332 - -
Bach14g00399 1004 SMART arm_5 916 956 IPR000225 GO:0005515
Bach14g00399 1004 SMART arm_5 531 571 IPR000225 GO:0005515
Bach14g00399 1004 SMART arm_5 448 489 IPR000225 GO:0005515
Bach14g00399 1004 SMART arm_5 709 750 IPR000225 GO:0005515
Bach14g00399 1004 SMART arm_5 365 405 IPR000225 GO:0005515
Bach14g00399 1004 SMART arm_5 872 912 IPR000225 GO:0005515
Bach14g00399 1004 SMART arm_5 666 706 IPR000225 GO:0005515
Bach14g00399 1004 SMART arm_5 572 615 IPR000225 GO:0005515
Bach14g00399 1004 SMART arm_5 751 795 IPR000225 GO:0005515
Bach14g00399 1004 Pfam U-box domain 265 331 IPR003613 GO:0004842|GO:0016567
Bach14g00399 1004 Gene3D - 862 1002 IPR011989 -
Bach14g00399 1004 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 263 331 IPR013083 -
Bach14g00399 1004 Gene3D - 332 431 IPR011989 -
Bach14g00399 1004 ProSiteProfiles U-box domain profile. 260 334 IPR003613 GO:0004842|GO:0016567
Bach14g00399 1004 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 542 584 IPR000225 GO:0005515
Bach14g00399 1004 Coils Coil 139 159 - -
Bach14g00399 1004 Pfam Armadillo/beta-catenin-like repeat 532 571 IPR000225 GO:0005515
Bach14g00399 1004 CDD RING-Ubox_PUB 265 314 IPR045210 -
Bach14g00399 1004 Coils Coil 74 94 - -
Bach14g00399 1004 SMART Ubox_2 264 327 IPR003613 GO:0004842|GO:0016567
Bach14g00399 1004 Gene3D - 632 853 IPR011989 -
Bach14g00399 1004 SUPERFAMILY ARM repeat 340 994 IPR016024 -
Bach14g00399 1004 Coils Coil 188 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00399 Bach-Chr14 2840249 2844225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00399 263 1004 U-box Gene Family AT1G76390 28.714 9.15e-63 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00399 - - qsa:O6P43_027410 1412.51