Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00381 ATGTCAGACGGTGCTGAAATAGAAGAGCGGGTAGACTTTGATGAGGAAAATTACATGGAAGAGATGGATGATGATGTTGAGGAACAAATAGATGAGGATGGAGCAGACCGAGGTGGTGATGAGAACATTGAAGAGAATGTTGAAGAACACGAGGACTCAGCAGGAGACGCTAGCACGAAAGACCAATTGCTTGAAGACTCAACTGTAGAGGCTGCTGAATCTATAGAAGATGAGCTAAACCAATCTTTCATTGATGAAGATGAGAAAGAGAAGCATGATAAACTTCTTGCCCTTCCTCCTCATGGTTCTGAAGTTTTCATTGGTGGACTTCCTCGAGATGTGATTGAGGATGAATTGAGGGAATTGTGTGATTCAATGGGTGATATTCTTGAGGTGAGATTAATGAAAGATAGGGACACAGGAGAAGGTAAAGGCTATGCTTTTGTGGCATTTAAAACAAAAGAGGCTGCACAAAAGGCCATAGAAGAGTTACATAACAAGGAATTTAAGGGTAAAACTCTAAGGTGTTCATTGTCTGAAAGTAAACATAGATTATTTATTGGTAATGTTCCAAAAAACTTGACTGAGAATGAGTTTAGGAAAGTCATTGAAGGTGTTGGTCCTGGAGTTGAAAACATTGAGCTCATAAAGGATCCTCAACAACCAAGCAGGAATCGTGGGTTTGCTTTTGTTTTGTATTACAACAATGCCTGTGCTGATTATTCACGTCAAAAGATGTCATGTGCAAATTTTAAGCTAGATGGTAATACACCAACTGTCACATGGGCTGACCCAAAGAACTCACCTGATCACTCTGCTACCTCGCAGGTTAAAGCTCTTTACGTGAAAAACATACCTGAGAATACTACTACTGAACAACTCAAGGAACTATTTTGCCGCCATGGGGAAGTAACAAAAGTGGTTATGCCACCTGGCAAAGCTGGAGGCAAACGTGATTTTGGTTTCATTCATTATGCAGAGAGGTCAAGTGCGTTGAAGGCTATAAAAGATACAGAAAAATATGAGATAGATGGGCAAGTGTTGGAAGTTGTTCTTGCAAAGCCTCAGACTGAGAAAAAGTCTGATGGGGGTTATGGATACAATCCCGGGCTTAATCCGAACCATCCTCCACATCCTGGGTACGGTGGTTTTTCAGGAAATCCGTATGGCTCTTTAGGGACTGGATATGGTGTGACTGGTTTTCAACAGCAGCCAATGATATATGGTAGAGGTCCAATGCCAGCAGGAATGCAAATGGTCCCAATGGTTTTACCCGATGGTCGAATTGGATATGTCCTTCAGCAGCCTGGTGTACAGATGCCAGGTCCCCGGCCTCGTCGGAGCAACGGTCCAGGTGGTCAGACCGGACGAGGAGGTAGTGTCAATGGTAATGAGGAGGGTAATCGTGGTAGAAGGTATCGACCCTATTAG 1431 0.4312 MSDGAEIEERVDFDEENYMEEMDDDVEEQIDEDGADRGGDENIEENVEEHEDSAGDASTKDQLLEDSTVEAAESIEDELNQSFIDEDEKEKHDKLLALPPHGSEVFIGGLPRDVIEDELRELCDSMGDILEVRLMKDRDTGEGKGYAFVAFKTKEAAQKAIEELHNKEFKGKTLRCSLSESKHRLFIGNVPKNLTENEFRKVIEGVGPGVENIELIKDPQQPSRNRGFAFVLYYNNACADYSRQKMSCANFKLDGNTPTVTWADPKNSPDHSATSQVKALYVKNIPENTTTEQLKELFCRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAIKDTEKYEIDGQVLEVVLAKPQTEKKSDGGYGYNPGLNPNHPPHPGYGGFSGNPYGSLGTGYGVTGFQQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQMPGPRPRRSNGPGGQTGRGGSVNGNEEGNRGRRYRPY 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00381 476 SMART rrm2_1 104 177 IPR003954 GO:0003676
Bach14g00381 476 Gene3D - 14 183 IPR012677 -
Bach14g00381 476 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 184 264 - -
Bach14g00381 476 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 9 406 - -
Bach14g00381 476 SUPERFAMILY RNA-binding domain, RBD 184 270 IPR035979 GO:0003676
Bach14g00381 476 FunFam Heterogeneous nuclear ribonucleoprotein Q isoform A 8 183 - -
Bach14g00381 476 SUPERFAMILY RNA-binding domain, RBD 270 382 IPR035979 GO:0003676
Bach14g00381 476 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 183 265 IPR000504 GO:0003723
Bach14g00381 476 Gene3D - 184 264 IPR012677 -
Bach14g00381 476 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 103 181 IPR000504 GO:0003723
Bach14g00381 476 MobiDBLite consensus disorder prediction 434 476 - -
Bach14g00381 476 CDD RRM_SF 105 177 - -
Bach14g00381 476 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 278 355 IPR000504 GO:0003723
Bach14g00381 476 MobiDBLite consensus disorder prediction 1 65 - -
Bach14g00381 476 SMART rrm1_1 104 177 IPR000504 GO:0003723
Bach14g00381 476 SMART rrm1_1 184 261 IPR000504 GO:0003723
Bach14g00381 476 SMART rrm1_1 279 351 IPR000504 GO:0003723
Bach14g00381 476 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 185 247 IPR000504 GO:0003723
Bach14g00381 476 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 280 348 IPR000504 GO:0003723
Bach14g00381 476 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 105 175 IPR000504 GO:0003723
Bach14g00381 476 SUPERFAMILY RNA-binding domain, RBD 98 182 IPR035979 GO:0003676
Bach14g00381 476 Gene3D - 265 386 IPR012677 -
Bach14g00381 476 MobiDBLite consensus disorder prediction 8 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00381 Bach-Chr14 2687049 2689987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00381 105 462 Eukaryotic Initiation Factors Gene Family AT1G71770 26.700 2.00e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00381 K13161 - gmx:100790907 710.679