Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00352 ATGGGTGACTCAGATGAAAGATTGGGTGATTCTTCGGCCGTTGAAGTAACCGGTAAGATCATGGTAGTAGCTATAATAATCCTGTTCTTTGTGCTTGTGTTTGTTCTCTTCCTCCATCTCTATGCCAAATGGTTCTGGTGGCGCATTGAAGAAACCACTCCCCAATCTCGCCGCCGCCGTCGCCGCCGGTTCGTCTTTGCCCCCGGTCAAGACCCTGCTATCTACGGAGCTGAGCGAAATGGGCTCGACCCTGCAGTCCTCAGGTCCTTACCTGTCTTAGTATTCCAACCAGAAGAGTTCAAAGATGGTTTGGAATGCGCTGTTTGCCTCTCTGAGCTTGTTCAAGGAGAAAAGGCTAGGATTTTACCCGAATGCAATCATGGGTTTCACGTAGATTGCATAGATATGTGGTTTCAATCCCATTCTACCTGCCCCCTTTGTAGGAAACATATCGATTCTGGATCATCAATATCCGCTGGCAATTCAGATGCTGGAGAAAATGCCTTCGAGAACAATGAATCACCAGTGGCAGAAAATTCAGCTGCTATGAGTAGCTTAGAGTCCCCAAATTTTCCCACAAATGTATTAATTTGGGGAAACCAGACCCAAGTAAGTTCTTTCGGTTTGGAAGTAGAAGGTCCTTCTCCTCAACCTCTTTGCTCCTCACCATCTACTACCCCATCTTCTTCATCAACAAGTACTAGTAATAATAGACATCATCGGATGTTGGTGATTGATATACCCAATGAGATCAATTCATCGGCTTTATCACCTTCCACCAGCAGGTTTGCTGAAGACGAGCTGAAATCACCAATGACAACGAGATTGAGGTCATTGAAGAGGCTTTTAAGCAGAGACAAGAGATTGTTAAGTCCTTGTACTCCCAGATCTACTGATGTAGAACAAGGGGGGAGGGTACAGAACTAG 927 0.4563 MGDSDERLGDSSAVEVTGKIMVVAIIILFFVLVFVLFLHLYAKWFWWRIEETTPQSRRRRRRRFVFAPGQDPAIYGAERNGLDPAVLRSLPVLVFQPEEFKDGLECAVCLSELVQGEKARILPECNHGFHVDCIDMWFQSHSTCPLCRKHIDSGSSISAGNSDAGENAFENNESPVAENSAAMSSLESPNFPTNVLIWGNQTQVSSFGLEVEGPSPQPLCSSPSTTPSSSSTSTSNNRHHRMLVIDIPNEINSSALSPSTSRFAEDELKSPMTTRLRSLKRLLSRDKRLLSPCTPRSTDVEQGGRVQN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00352 308 Pfam Ring finger domain 105 148 IPR001841 -
Bach14g00352 308 SUPERFAMILY RING/U-box 86 153 - -
Bach14g00352 308 FunFam RING-H2 finger protein ATL3 75 153 - -
Bach14g00352 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 153 IPR013083 -
Bach14g00352 308 MobiDBLite consensus disorder prediction 208 238 - -
Bach14g00352 308 CDD RING-H2_EL5-like 105 148 - -
Bach14g00352 308 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Bach14g00352 308 MobiDBLite consensus disorder prediction 287 308 - -
Bach14g00352 308 MobiDBLite consensus disorder prediction 158 185 - -
Bach14g00352 308 SMART ring_2 106 147 IPR001841 -
Bach14g00352 308 MobiDBLite consensus disorder prediction 217 238 - -
Bach14g00352 308 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00352 Bach-Chr14 2422594 2423520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00352 15 287 C3H Transcription Factor Family AT1G53820 45.578 3.24e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00352 - - qsa:O6P43_027473 335.109