Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00329 ATGGCCACAACCACTACCGCAGCGCCGCCGCAACAAATGTCGCAGAAAGAGGCTGACATCCAGATGATGTTGGCCGCCGAGGTCCACCTGGGAACCAAAAACTGCGACTTTCAAATGGAACGCTACGTCTTCAAGCGCCGCAACGATGGCATCTACATTATCAACCTTGGTAAAACATGGGAAAAACTTCAGCTTGCTGCCAGGGTTATCGTTGCCATTGAGAACCCACAGGATATTATCGTTCAGTCTGCCAGACCCTATGGTCAGAGAGCTGTTCTTAAGTTTGCTCAGTACACTGGCGCCCATGCAATTGCCGGAAGGCACACTCCCGGAACATTCACCAATCAGCTCCAGACATCATACAGTGAGCCTCGCCTTCTCATCCTTACCGACCCTAGAACCGATCATCAGCCCATTAAGGAAGCCGCTCTTGGAAATATACCAACTATTGCTTTCTGTGACACGGATTCACCAATGCGTTATGTTGACATTGGCATCCCTGCCAATAATAAGGGAAAGCACAGCATCGGTTGTCTCTTTTGGCTTCTGGCTAGGATGGTGTTGCAAATGCGGGGTACTATTCGTCCTGGGCTTAAGTGGGATGTGATGGTTGATTTATTCTTCTACCGAGAACCTGAGGAGGCCAAGCAACAAGAGGAAGATGAAGCACCTGTTGCCCCTGAGTATGCCATTGCAGACTTCAATGCTGGTGGCATTACTGCTGATGGTCAGTGGCCTGCTGCTGCAATTGATCAATCATGGACTGAAGTAGTTCCACCACAACCTATATCAGCGGTTCCTAAAGTCGGCTGGACCCCAGATGTTGCAGGAGATTGGGGTGACTCTGTTCCACCGGCACAACTTCCTCCAACCGGTGACTCTGTTCCACCACCACAACTTCCTCCAACCGGAATTGAAAGTGTTCCTGCTACAGGCTGGGATTAA 945 0.5026 MATTTTAAPPQQMSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSYSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEDEAPVAPEYAIADFNAGGITADGQWPAAAIDQSWTEVVPPQPISAVPKVGWTPDVAGDWGDSVPPAQLPPTGDSVPPPQLPPTGIESVPATGWD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00329 314 PANTHER 40S RIBOSOMAL PROTEIN SA 10 286 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bach14g00329 314 Pfam Ribosomal protein S2 23 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 Pfam Ribosomal protein S2 121 187 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 NCBIfam 30S ribosomal protein S2 15 211 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bach14g00329 314 SUPERFAMILY Ribosomal protein S2 15 205 IPR023591 -
Bach14g00329 314 Hamap 40S ribosomal protein SA [rps-0]. 7 248 IPR027498 GO:0003735|GO:0006412|GO:0015935
Bach14g00329 314 CDD RPS2 23 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 FunFam 40S ribosomal protein SA 19 225 - -
Bach14g00329 314 ProSitePatterns Ribosomal protein S2 signature 1. 20 31 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 ProSitePatterns Ribosomal protein S2 signature 2. 124 148 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 Gene3D - 19 224 - -
Bach14g00329 314 MobiDBLite consensus disorder prediction 268 314 - -
Bach14g00329 314 PRINTS Ribosomal protein S2 signature 20 38 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 PRINTS Ribosomal protein S2 signature 50 59 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 PRINTS Ribosomal protein S2 signature 162 176 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 PRINTS Ribosomal protein S2 signature 124 141 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 PRINTS Ribosomal protein S2 signature 99 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 PRINTS Ribosomal protein S2 signature 141 152 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach14g00329 314 MobiDBLite consensus disorder prediction 289 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00329 Bach-Chr14 2239285 2241360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00329 1 286 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 75.000 1.33e-153 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00329 K02998 - gmx:548014 514.227