Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00319 ATGCAGAATCAGAGGCTAAAGCAGCAGCAGCAGCAAGCTCTGATGCAACAAGCTCTTCTTCAGCAACAGTCTCTCTACCACCCTGGCATCTTAGCTCCTCCTCAGATTGAGCCAATTCCAAGTGGAAATTTGCCTCCTGGTTTTGATCCAAGTACTTGCCGCAGTGTGTATGTGGGGAATATCCATGCACAGGTGACTGAACCACTTCTGCAAGAAGTTTTTTCAAATGCTGGCCCTGTTGAAGGGTGCAAAGTTGTTAGAAAGGAGAAGTCATCATATGGATTCATTCACTATTTTGATCGGAGATCTGCTGCTCTTTCCATTTTAACTCTCAATGGAAGGCATCTGTTTGGGCAGCCTATCAAAGTTAACTGGGCATATGCTAATGGTCAGAGAGAGGATACCACAGGTCATTACAACATATTTGTTGGTGATCTTAGTCCAGAGGTTACTGATGCTACGTTATTTGCATGCTTTTCTGTTTATCCCAGTTGTTCAGATGCAAGGGTAATGTGGGATCAGAAGACTGGCCGGTCAAGGGGTTTTGGATTTGTTTCCTTCCGTAATCAGCTGGATGCTCAAAGTGCAATAAATGATTTGACTGGTAAGTGGCTTGGTAGTAGACAAATACGTTGTAACTGGGCAACAAAGGGTGCTGGTGCCATTGAAGATAAGCAAAACTCAGAAACTAAGAGTGTGGTTGAACTAACAAATGGTTCTGAAGATGGTAAAGAGACAACTAACAGTGATGCTCCTGAGAACAATCCTCAATATACTACCGTCTATGTGGGCAATCTTGCTCCAGAGGTAACCCAGCATGATCTGCATCGCCACTTCCATGCACTTGGAGCTGGTGCTATTGAGGAGGTCCGTGTCCAGCGTGATAAGGGGTTTGGTTTTGTGAGGTACAGTACTCACGCTGAAGCAGCTCTGGCTATCCAGATTGGGAATACCCAGTCAATCCTCTGTGGCAAGCAAATTAAGTGCTCCTGGGGGAGCAAGCCCACTCCACCTGGAACTGCTTCGAATCCTCTTCCACCACCTGCTTCCGGTCCTTTGCCAGGCCTCTCTGCAGCAGATCTTTTGGCATACGAGCGTCAGCTTGCAATAAGCAAGATGGGCGGTATTCATACCCTGATGCATCCCCAAGGGCAACATCCTCTCAAACAAGCAGCAATTGGAGCAAGCCAGATATATGACGGTGGCTTCCAGAATGTTGCTGCTGCACAACAGCTGATGTATTACCAGTAAAAATAACAGGGTTCTTGTGATATGATTTAATCATTTAATCCTATCTATTTATCCTGCCTTGTTCGCGTTCAATCGTGTTAAACTCGTGAGTCCTTTTTTTTTTTTTTTTTTCTCTTCTAATTTACTTTTTCTTCTTACGGTGGTGAGGCAGTTACCATCACCATGTTAGATGTGTCAACATTTGTATGGGTTTGTAACTTTGTATCATGTATGCGGTTTTCGTTTTCTGATTAATAGTGATGAGTGGCTATAATTTGAAGAGGGGATGGCTAGTCATGGCTAGTCAAGCACTACCCAATGTGTTCGTGATTTCACGAACACATCTATGTACATTGTGCAAATTTCAATCGTGC 1604 0.4426 MQNQRLKQQQQQALMQQALLQQQSLYHPGILAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHAQVTEPLLQEVFSNAGPVEGCKVVRKEKSSYGFIHYFDRRSAALSILTLNGRHLFGQPIKVNWAYANGQREDTTGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQLDAQSAINDLTGKWLGSRQIRCNWATKGAGAIEDKQNSETKSVVELTNGSEDGKETTNSDAPENNPQYTTVYVGNLAPEVTQHDLHRHFHALGAGAIEEVRVQRDKGFGFVRYSTHAEAALAIQIGNTQSILCGKQIKCSWGSKPTPPGTASNPLPPPASGPLPGLSAADLLAYERQLAISKMGGIHTLMHPQGQHPLKQAAIGASQIYDGGFQNVAAAQQLMYYQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00319 416 MobiDBLite consensus disorder prediction 223 257 - -
Bach14g00319 416 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 52 337 - -
Bach14g00319 416 Gene3D - 136 228 IPR012677 -
Bach14g00319 416 Gene3D - 1 135 IPR012677 -
Bach14g00319 416 SUPERFAMILY RNA-binding domain, RBD 250 345 IPR035979 GO:0003676
Bach14g00319 416 SMART rrm1_1 140 213 IPR000504 GO:0003723
Bach14g00319 416 SMART rrm1_1 260 330 IPR000504 GO:0003723
Bach14g00319 416 SMART rrm1_1 55 124 IPR000504 GO:0003723
Bach14g00319 416 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 54 128 IPR000504 GO:0003723
Bach14g00319 416 FunFam oligouridylate-binding protein 1-like isoform X2 137 232 - -
Bach14g00319 416 CDD RRM2_PUB1 138 217 - -
Bach14g00319 416 Gene3D - 237 338 IPR012677 -
Bach14g00319 416 SUPERFAMILY RNA-binding domain, RBD 38 132 IPR035979 GO:0003676
Bach14g00319 416 FunFam Oligouridylate-binding protein 1C 237 338 - -
Bach14g00319 416 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 261 322 IPR000504 GO:0003723
Bach14g00319 416 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 56 122 IPR000504 GO:0003723
Bach14g00319 416 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 141 211 IPR000504 GO:0003723
Bach14g00319 416 Coils Coil 3 23 - -
Bach14g00319 416 FunFam oligouridylate-binding protein 1B-like isoform X2 1 136 - -
Bach14g00319 416 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 139 217 IPR000504 GO:0003723
Bach14g00319 416 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 259 334 IPR000504 GO:0003723
Bach14g00319 416 SUPERFAMILY RNA-binding domain, RBD 135 218 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00319 Bach-Chr14 2167437 2173749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00319 137 327 Eukaryotic Initiation Factors Gene Family AT1G49760 28.866 9.50e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00319 K13201 - gmx:100781227 735.717