Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00279 AATTACTCAAGTTCGATGGATTATTATACTCAACAGATGCAATTCGAAGCTAACCCTCCCGCCTACAATGGCGAACAATTTCACGAAGGGGTTTTTCGACATCAACAAGAACTAGGAGGAGAAGAAGAAGAGTCTTACTCAGGGCATGATTTTGATCCGAGTGTCAATCTAAATGGTACGGGCGTTAAGATAAAGCCCACAGTCAATCGTCGTGATTCTTCTTCAGGAAAACTATTCGTTGGAGGCATATCCTGGGAGACCACTGAAGAGTCATTCTTTAAGTACTTCAACAAATACGGAGAAGTACTTGATTCTGTGATAATGATGAATAAACACTCTGGAAGGCCACGGGGGTTTGGTTTTGTAACATTTGCTGATTCAGCTGTTGCAGATGAAGTCTTAGGACAGGAACATACCATAGATGGAAGAGTGGTTGAAGTCAAGAGGACAGTCCCTAGGGAGGACATGGAAGTTGTAGGGGTAACGAGAACAAGGAAAATATTTGTTGGTGGAATACCACAATTTTTCACTGACGATGAGCTGAGGGAATACTTTTCTCCTTACGGTAGTATTGTTGAGTGCCAGATAATGCTAGATCATAAGACTGGACGGTCTAGAGGCTTTGGATTTGTCACTTTTGAGAATGAAGATTCAGTTGATAAGGTTTTTTCTGCCGGAAAAATTCATGAACTTGGAGGCAAGCAGGTTGAGATTAAGAGAGCTGAACCCAAAAGAGCCGGGGTTGACTCCAGTGGCAGTTCACGAAAGTCATATGGTGGTTTTAGCAGTGGAACAGATGGATTTGGTCGACATAATTCTAGAGGTCGGAATGACGGGAAAAGTGGTGGGCCATACGCAGAGACCGGCATGAATGGGGCATACAGCAATTTCCATGGGAACTATGGTGGAAGCTCTGCCACTCCTTATGGTACCTATGGTGCTTATGGCTATGGATTTGGGTACGGTGGACCGATGTATTACTTTGGCGGTTATGGAGTTAACTCTTACGGTAATCCTACCGGTTATGGAGGCGTTCCTGGCTACGGGGATATTAAAGCATATGGAAGAGCTAGTAGTTATAATCGGGCTGGTGGCTATGACAGTGGCAAAGTAGTGGAGAAGGATGGTGGTTATGGTACCGGAAGATACCATCCTTACTCTAAGTGA 1167 0.4422 MDYYTQQMQFEANPPAYNGEQFHEGVFRHQQELGGEEEESYSGHDFDPSVNLNGTGVKIKPTVNRRDSSSGKLFVGGISWETTEESFFKYFNKYGEVLDSVIMMNKHSGRPRGFGFVTFADSAVADEVLGQEHTIDGRVVEVKRTVPREDMEVVGVTRTRKIFVGGIPQFFTDDELREYFSPYGSIVECQIMLDHKTGRSRGFGFVTFENEDSVDKVFSAGKIHELGGKQVEIKRAEPKRAGVDSSGSSRKSYGGFSSGTDGFGRHNSRGRNDGKSGGPYAETGMNGAYSNFHGNYGGSSATPYGTYGAYGYGFGYGGPMYYFGGYGVNSYGNPTGYGGVPGYGDIKAYGRASSYNRAGGYDSGKVVEKDGGYGTGRYHPYSK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00279 383 Gene3D - 69 152 IPR012677 -
Bach14g00279 383 SUPERFAMILY RNA-binding domain, RBD 158 267 IPR035979 GO:0003676
Bach14g00279 383 FunFam Heterogeneous nuclear ribonucleoprotein 1 70 151 - -
Bach14g00279 383 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 152 287 - -
Bach14g00279 383 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 162 230 IPR000504 GO:0003723
Bach14g00279 383 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 73 140 IPR000504 GO:0003723
Bach14g00279 383 SMART rrm1_1 161 234 IPR000504 GO:0003723
Bach14g00279 383 SMART rrm1_1 72 143 IPR000504 GO:0003723
Bach14g00279 383 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 160 238 IPR000504 GO:0003723
Bach14g00279 383 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 60 383 - -
Bach14g00279 383 MobiDBLite consensus disorder prediction 234 279 - -
Bach14g00279 383 Gene3D - 155 297 IPR012677 -
Bach14g00279 383 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 71 147 IPR000504 GO:0003723
Bach14g00279 383 MobiDBLite consensus disorder prediction 245 265 - -
Bach14g00279 383 SUPERFAMILY RNA-binding domain, RBD 64 151 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00279 Bach-Chr14 1897505 1899938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00279 73 236 Eukaryotic Initiation Factors Gene Family AT1G49760 25.301 6.27e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00279 K12741 - gmx:100818080 486.108