Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach14g00269 ATGCTTAAGTGCATTAGCGCTCAGCTCTCAATAGCCTCCTTTTCCCCCTCGCTTACTCTGTCACATAGAACTATTACTCGCAAGCATTCAGCATTACTACCAGTTATGGCAGGTTTGGCATCAGAGGGAACACAGTTTGATGCTCGTCAATATGATAATAAAATGAGTGAATTGCTTTCTACTGATGGACAAGAATTTTTCACCTCATATGATGAAGTCTATGAAAGTTTTGATGCCATGGGATTACAGGAAAATCTTCTGAGAGGCATTTATGCTTATGGTTTTGAGAAGCCTTCAGCAATCCAGCAAAGGGGAATTGTTCCTTTCTGCAAAGGTCTTGATGTGATTCAGCAGGCTCAATCTGGAACTGGGAAGACAGCAACATTCTGCTCTGGAATTCTGCAGCAGCTTGATTATGGATTGGTTCAGTGCCAGGCCTTGGTTTTGGCACCTACAAGGGAGCTAGCACAGCAAATTGAGAAAGTTATGCGAGCTCTTGGTGATTACCTTGGTGTTAAAGTTCACGCTTGTGTGGGTGGGACAAGTGTCCGTGAGGATCAGCGCATCCTACAAGCTGGTGTCCATGTTGTTGTTGGTACGCCTGGTCGTGTGTTCGACATGCTAAGGAGGCAGTCACTTCGCCCAGATCACATTAGGATGTTTGTTTTGGATGAGGCTGATGAAATGCTTTCACGTGGTTTCAAGGACCAGATCTATGACATCTTCCAGCTACTGCCTGCAAAAATTCAGGTTGGAGTCTTCTCTGCTACAATGCCCCCAGAAGCTCTTGAGATCACAAGGAAGTTCATGAACAAGCCAGTGCGAATCTTGGTAAAGCGTGATGAACTGACCCTGGAGGGTATCAAGCAGTTCTATGTCAATGTTGAAAAGGAGGAGTGGAAGCTGGAAACTTTATGCGACCTCTACGAAACACTGGCTATCACCCAGAGTGTCATTTTCGTGAACACCCGTCGCAAGGTTGATTGGCTCACCGACAAGATGCGAAGCAATGACCACACAGTGTCAGCCACCCACGGTGATATGGATCAAAACACCCGTGATATAATTATGCGTGAATTTCGATCTGGGTCTTCTCGAGTTCTCATTACCACTGATCTCTTGGCTCGTGGTATAGATGTGCAGCAAGTTTCTCTTGTCATAAACTATGATCTGCCGACACAACCTGAAAATTATCTTCATCGTATCGGCCGAAGTGGACGATTCGGAAGAAAGGGTGTTGCTATAAACTTTGTGACACTGGATGATTCCAGAATGCTCTCTGATATTCAGAAGTTTTATAATGTCACCGTAGAGGAGCTGCCGTCAAATGTTGCTGATCTGCTCTGA 1347 0.4521 MLKCISAQLSIASFSPSLTLSHRTITRKHSALLPVMAGLASEGTQFDARQYDNKMSELLSTDGQEFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDHIRMFVLDEADEMLSRGFKDQIYDIFQLLPAKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSNDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDSRMLSDIQKFYNVTVEELPSNVADLL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach14g00269 448 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 72 432 - -
Bach14g00269 448 CDD SF2_C_DEAD 288 418 - -
Bach14g00269 448 FunFam Eukaryotic initiation factor 4A-II 63 282 - -
Bach14g00269 448 Gene3D - 284 448 IPR027417 -
Bach14g00269 448 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 106 276 IPR014001 -
Bach14g00269 448 CDD DEADc_EIF4A 79 277 - -
Bach14g00269 448 Gene3D - 65 283 IPR027417 -
Bach14g00269 448 Pfam DEAD/DEAH box helicase 100 261 IPR011545 GO:0003676|GO:0005524
Bach14g00269 448 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 75 103 IPR014014 GO:0003724
Bach14g00269 448 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 222 230 IPR000629 -
Bach14g00269 448 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 287 448 IPR001650 -
Bach14g00269 448 SMART ultradead3 94 291 IPR014001 -
Bach14g00269 448 SMART helicmild6 328 409 IPR001650 -
Bach14g00269 448 FunFam Eukaryotic initiation factor 4A-III 283 448 - -
Bach14g00269 448 Pfam Helicase conserved C-terminal domain 301 409 IPR001650 -
Bach14g00269 448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 429 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach14g00269 Bach-Chr14 1836796 1840482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach14g00269 36 448 Eukaryotic Initiation Factors Gene Family AT1G72730 88.889 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach14g00269 K03257 - gmx:100777628 796.578