LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach14g00261	ATGGCTCTATCACGGACAGCATCAAATTTAGAAGATGGCTCTGCGGGCCCCACCGTGATCGCCGTTGATAAAGACAGGAATAGTCATTTCGCTGTCAAATGGGCCGTTGAACACCTCTCGAAGAAGAATTCTCCATGCACCCTTGTTCACGTTCGGATAAAGAAATTGCATCCCAATGATGATGATGCTGTCCTCAAAGAAGGTCGCCCACCTACCGAAGAAGAACTGCACCAATTTTTTCTTCCCTTCAGAGGATTTTGTGCTCGAAAAGGGATCGAAGCGAAGGAGTTGGTCCTCCATAACACTGATGTGTCAACTGCACTTACTGATTATGTCATAAGCAACTCTGTGAGGAATATTGTTGTTGGTTCACCCCACCGGAATGTTATTACAAGGACATTTAAAGATGCAGATGTGCCAACTAACTTACTCAAGTCCCTGCCACAGTCTTGCATATTACATGTTATATCAAAAGGAAAAGTACAGAGTATACGACCAACAGGTCATTCTCACAATGTTAGCATCTCAGCAACTGGGTCTATAAAAATCGTAGCCACTACCAAGGAAAATTCTCTTCTAGATCATTCACCTACGCTTCCTCCTAATACACCAGACTCTGAAGATAACAACAGTGATGGAAATTGGAATGGCTCAAACTTGCATAAAGTATCTTCAGGTCAAAAAATTCATGCTACGCAGGTGGAATCACATGAGTCTAAGGGAGATGTTAATTCACCAAGACTATCGGCAGAAAGCTCCTCACCACAGAGTTCAAGTCAACATTCCGTTTCACCCCGCAGAGACCGCTCGGGGCAGAGTAGTGGTCTTTCGACTGATGTACTCCATGAAAACCTAGAAGTGCCCTTGAACTCAGACAGTCCCAAGAGTGGCACTCCTTCCAAAACCGCAAAAGCGCTGGAGGTCGAGATGAAGAGATTAAAACTGGAACTACAGATAACAATGGAGAAATATAGTTCAGCGTGCAGGGAAGCTGTTGCAGCAAAACAGAAGGCAATGGAGCTTGAACAGAATAGGAAAGAAGAAGAGCGCAACTTGGAAGAAGCCAGACAGGCTGAAGAGGCTGCATTGGCTTTGGCAGAGCTAGAAAGGCAGAAAAGAAGGGCTGCCGTGGAGTCAGCACTAATGGCAGAACGCCTAGCTAAAATGGAGAACCAGAAGAGAAAGGAAGCAGAAATGAGAGCCATGCATGAGGAAGAAGAGAGGAAGAGAGCATTAAATGCACTAGTATGTAATCATATTCCATGTAGAAAATACGATATTGAAGAAATTGAAGTTGCTACACGTTACTTTGACCATGCTCGGAAAATTGGTGAAGGTGGATATGGACCTGTTTATTACGGGTTGCTTGATCACACTGCTGTTGCCATTAAGGTTTTGAGACCAGATTTGGCCCATGGAGAGAGGCAATTCCAACAAGAGGTTGAGGTTTTGAGCACCATAAGACATCCAAACATGGTTCTCCTTCTAGGTGCCTGCCCAGAGTATGGATGCCTTGTGTACGAGTACTTGGAAAATGGCAGCTTAGAAGACCGTCTATTTCGGAAAGATAACACTCCACCTCTTTCATGGCAAACTAGGTTCAAAATAGCAGCAGAAATTGCCACTGGCCTTCTTTTCCTCCACCAGACAAAACCGGAGCCATTTGTGCACCGTGACCTCAAGCCAGCAAACATACTCCTAGACCGTAATTTTGTGAGCAAGATCAGTGATGTGGGTTTGGCCAGGCTTGTTCCACCATCAGTAGCTAACACAACCACACAATATCACATGACAGCTGCAGCTGGTACATTTTGCTATATTGACCCAGAGTATCAACAAACAGGACTGTTGGGGGTGAAATCAGATATATATTCATTAGGCGTAATTCTGCTACAAATTATTACAGGAAAGCCTCCTATGGGCTTAACCCACCTGGTTGAGAAGGCCATTGAAAATGGTCGATTTCATCTGGTGCTTGATCCCAGTGTGCCGGATTGGCCAGTTGAAGAGGCTTTACCATATGCTAAATTGGCTTTACAATGTTGTGAGTTGAGGAAACGTGACCGACCAGATCTTGGTACTGTTATTTTGCCGGAGCTGAATCGACTCAGAGAACTGGGAGAAATTGATAGTGATAATCTAACTACAACACAGGTTAGACCTCTGGACTATTTAAACTTAATGTGA	2187	0.4435	MALSRTASNLEDGSAGPTVIAVDKDRNSHFAVKWAVEHLSKKNSPCTLVHVRIKKLHPNDDDAVLKEGRPPTEEELHQFFLPFRGFCARKGIEAKELVLHNTDVSTALTDYVISNSVRNIVVGSPHRNVITRTFKDADVPTNLLKSLPQSCILHVISKGKVQSIRPTGHSHNVSISATGSIKIVATTKENSLLDHSPTLPPNTPDSEDNNSDGNWNGSNLHKVSSGQKIHATQVESHESKGDVNSPRLSAESSSPQSSSQHSVSPRRDRSGQSSGLSTDVLHENLEVPLNSDSPKSGTPSKTAKALEVEMKRLKLELQITMEKYSSACREAVAAKQKAMELEQNRKEEERNLEEARQAEEAALALAELERQKRRAAVESALMAERLAKMENQKRKEAEMRAMHEEEERKRALNALVCNHIPCRKYDIEEIEVATRYFDHARKIGEGGYGPVYYGLLDHTAVAIKVLRPDLAHGERQFQQEVEVLSTIRHPNMVLLLGACPEYGCLVYEYLENGSLEDRLFRKDNTPPLSWQTRFKIAAEIATGLLFLHQTKPEPFVHRDLKPANILLDRNFVSKISDVGLARLVPPSVANTTTQYHMTAAAGTFCYIDPEYQQTGLLGVKSDIYSLGVILLQIITGKPPMGLTHLVEKAIENGRFHLVLDPSVPDWPVEEALPYAKLALQCCELRKRDRPDLGTVILPELNRLRELGEIDSDNLTTTQVRPLDYLNLM	728

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach14g00261	728	SMART	serkin_6	437	700	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach14g00261	728	MobiDBLite	consensus disorder prediction	245	276	-	-
	Bach14g00261	728	FunFam	U-box domain-containing protein 51	510	710	-	-
	Bach14g00261	728	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	19	134	-	-
	Bach14g00261	728	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	410	509	-	-
	Bach14g00261	728	MobiDBLite	consensus disorder prediction	191	232	-	-
	Bach14g00261	728	Gene3D	Transferase(Phosphotransferase) domain 1	510	718	-	-
	Bach14g00261	728	Gene3D	HUPs	4	155	IPR014729	-
	Bach14g00261	728	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	555	567	IPR008271	GO:0004672\|GO:0006468
	Bach14g00261	728	Gene3D	Phosphorylase Kinase; domain 1	416	509	-	-
	Bach14g00261	728	PANTHER	OS02G0152300 PROTEIN	19	708	-	-
	Bach14g00261	728	CDD	STKc_IRAK	443	703	-	-
	Bach14g00261	728	Pfam	Universal stress protein family	19	151	IPR006016	-
	Bach14g00261	728	SUPERFAMILY	Protein kinase-like (PK-like)	417	695	IPR011009	-
	Bach14g00261	728	MobiDBLite	consensus disorder prediction	191	276	-	-
	Bach14g00261	728	Pfam	Protein kinase domain	439	690	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach14g00261	728	Coils	Coil	303	415	-	-
	Bach14g00261	728	CDD	STK_N	17	159	-	-
	Bach14g00261	728	ProSiteProfiles	Protein kinase domain profile.	437	700	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach14g00261	Bach-Chr14	1774359	1780197	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach14g00261	1	708	Receptor kinase-like Gene Family	AT1G78940	48.525	0.0	636

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Bach14g00261		Pkinase	1.2e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach14g00261	-		-	pcin:129290405	843.573