Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01486 ATGAAGAGCAGCAGCTCACAAGTTATAACATGCAAAGCTGCTGTTTGTTGGGGGATCGGAGAGAGTGTGAAGATTGAAGAGATACAAGTAGAGCCTCCAAAGGAATCTGAAGTTCGAGTTAAGATGCTTTGTGCCAGTCTCTGCCATACAGATATATCCAGCACTCGAGGATTCCCACAAAGTAATTTTCCTCAAGCACTAGGACATGAAGGAGTTGGGGTAGTAGAAAGCGTGGGAGATGAAGTCAGAAATGTGAAAGCAGGGGATGTTGTGATCCCAACGTACATAGGGGAGTGCAATGAATGTGAGAATTGTGTTTCTGGAAAAAGCAACCTGTGCCTGAGATACCCTCTAAGCTTGAGTGGCTTAATGTCTGATAATACTTCAAGAATGTCCGTAAGGGCCCAGAAGCTATACCATGTGTTAAGTTGTGCCACTTGGAGTGAGTACATGGTTATTGATTCCAACTACCTTCTCAAAGTTGATCCAACCATTGATCTTGCGTATGCTAGCTTCATCTCATGTGGCTTCTCAACTGGTTTTGGTGCTGCTTGGAAGGAAGCTCAGGTTGAAACCGGATCAACTGTCGTCGTTTTTGGTCTTGGAGCTGTTGGGTTAGGGGCTGTAAGCGGAGCCAAAATGTTGGGGGCAACTAAGATAATCGGAGTTGACATAAACAATATGAAGAAAGCCAAGGGTGAGGTTTTTGGAATGACGGATTTTATAAATCCCAGTGAATCAGAAAGATGTGCTTCAGCTTCAGAATTGATAAAGGAGTTGAGTGGTGGAGTGGGCGTGGATTATTCCTTTGAGTGTACTGGAATTGCTTCTTTGCTTTCTCAAGCCATAGAAGCCACAAAAGCGGGAAAAGGAAAGACAATTGCCATCGGCACTGGAACTGAAGCTACAGTTCCTATCAATTTTGCTGCTCTTATGATGGGGAGAACCATCCAGGGTTCTGTTTTTGGAGGGCTAAAATCAATGTCTGACCTTTCCATTATGGCTCAGAAATGCCTCAAAAAGGAAATCCCCCTTCATGAACTTTTCACCCATCAGCTCCCATTGCAAGAAATAAACAAAGCATTTGAGCTATCAAAACAGCCAGATTGTGTCAAAATTCTTATCAAGATGTGA 1134 0.4347 MKSSSSQVITCKAAVCWGIGESVKIEEIQVEPPKESEVRVKMLCASLCHTDISSTRGFPQSNFPQALGHEGVGVVESVGDEVRNVKAGDVVIPTYIGECNECENCVSGKSNLCLRYPLSLSGLMSDNTSRMSVRAQKLYHVLSCATWSEYMVIDSNYLLKVDPTIDLAYASFISCGFSTGFGAAWKEAQVETGSTVVVFGLGAVGLGAVSGAKMLGATKIIGVDINNMKKAKGEVFGMTDFINPSESERCASASELIKELSGGVGVDYSFECTGIASLLSQAIEATKAGKGKTIAIGTGTEATVPINFAALMMGRTIQGSVFGGLKSMSDLSIMAQKCLKKEIPLHELFTHQLPLQEINKAFELSKQPDCVKILIKM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01486 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 340 IPR036291 -
Bach13g01486 377 CDD liver_alcohol_DH_like 9 376 - -
Bach13g01486 377 PANTHER ALCOHOL DEHYDROGENASE 7 369 - -
Bach13g01486 377 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Bach13g01486 377 SUPERFAMILY GroES-like 5 191 IPR011032 -
Bach13g01486 377 Gene3D - 15 372 - -
Bach13g01486 377 Gene3D - 180 320 - -
Bach13g01486 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Bach13g01486 377 Pfam Zinc-binding dehydrogenase 203 328 IPR013149 -
Bach13g01486 377 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 320 - -
Bach13g01486 377 FunFam alcohol dehydrogenase 1-like isoform X1 19 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01486 Bach-Chr13 18555348 18557050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01486 37 369 Monolignol Biosynthesis Gene Families AT1G72680 24.926 7.22e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01486 K00121 - gmx:100798341 540.421