Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01465 GGGTACTCATTATAATTGTAATATTCTCAAAAGCCTTTCGCTTCTTTTTTTTTTCCAATTTTTAGGATTTTGGATTTTGATCTTATTTTCATCAGTTAGGGCTCGTCTTCCTGGTTGCTATTCAATTGGGCATCAGAACATGATACATCATCTATTGAAATTTGTTTATTTTCTGGGTTTGATCACTTCTCAGTGATCTCTGAAGCCGAATTATGAATGCAGTGGCCAGTAATTTTTAGTTTACCTATGGCATAAGTGTTATTTCGTTTAATCTAATCGGATTTCTGAGGTTACTTGTAATTATCTCAATTGTTTGGTTGCTTAGAGTTAGCCACCGAGGACATTGGGGTAATTGTTGGGAAAAGAGAATAAAATGATGAGGCTGCAGACATATGCTGGCCTTAGTTTGATTGCGACTCTTGCTGTTACATATTATGCATTCAATAGTAGAGACCAGTTTTATCCTGCAATGGTGTATCTCTCAACTTCCAAGATTTGTTTGGTGCTTCTTCTCAACATGTGTCTGGTCATCATGTGTGTTTTATGGCAATTAACAAAAAAGGTATTCCTAGGTTCCCTGCGGGAAGCCGAGGTCGAGAGGCTTAATGAGCAATCATGGAGAGAGGTTATGGAAATCCTCTTTGCAATTACTATTTTTAGGCAGGACTTCTCTGTTACATTCCTTGCTATGGTCACTGCACTTCTGTTGATTAAGGCTTTGCATTGGTTGGCTCAGAAGAGAGTGGAGCACATAGAAACCACTCCTACAGTCTCCACATTGTCTCACGTTCGAATTGTATCTTTTATGGGTTTCATCCTTCTTCTTGATGGCCTCTTCTTATATAGCTCTATGAAACATTTGATACAAACATGGCAGGCTTCAGTTTCTATCTTCTTTGCTTTTGAGTACATGATTCTGGCAACAACAACAGTGTCCGTTTTTGTAAAATACCTTTTCTATGTCAGTGACATGCTAATGGAGGGACAATGGGAAAGCAAACCAGTCTTCACATTTTACCTGGAACTTATCCGGGACTTACTCCACTTGTCTATGTATCTGTGCTTCTTTCTTGTAATCTTCATAAACTATGGTGTTCCTTTGCACTTAATACGGGAGCTCTACGAGACATTCAGGAACTTCAAAGTCCGTGTTGCTGATTACATACGTTATCGTAAGATCACTTCAAATATGAATGACCGGTTTCCAGATGCAACCCCTGAAGAGCTTAATGCAAGTGATGCAACCTGCATTATCTGTCGTGAAGAGATGATTACTGCCAAGAAACTAATATGTGGACATCTTTTCCATGTGCATTGCCTGCGGTCATGGTTGGAGCGACAACATACTTGCCCTACCTGCAGAGCTTTAGTTGTACCACCGGAAAATGGAACAACTGCTGCTGGAGGGCAGCATGTACAACAGTCACACGTTAACCAACAGGGAACAGGAACTGGAAGCACGAGAGAAGCTCCAGCAGCTGGTGTGGTGGCAGGCGATAATTTGAGTCAGCATCAAGCAAGACTCCAAGCTGCTGCTGCAGCTGCTTCAATATATGAGAAGTCTTATGTTTACCCATCTGCGTCTTCTTTAGTATGGTCCCCTGGATATGCTGTTTATCCTCCTATTCAAAGACATATGGCTGAATCTACTGATACTGAGCTCAATGGAGAACAAGATATTGAACAAGCACAGAAACAGTTTGGTGGACCAACAAACATGTCCTTTCCTCCAATTGGGAAATGTCTCTTTCTTCCTTCCCGGACATGTGGAGCCAATTTGAATTATGGAGAAGGATTTGGAAATGATCCAAATATGCCAAACTCTCTGTTGGAAGATCAAAGAAAACTTATTCAGTACCAGATTGAGATTCTGCAAAACCAGCTCCAGCTTCTGGAGAAGATAAAGGTTAAGGGAAGCTCAGATGAAGGTACATCATTATCTGATAGCAGAGGGAAGAACATCGCATCCTCATCTTCTGCATCTAATATTGGTAGTCATGACGAGATTCAAGATAACAATGCATAAACTCTTGCTAATTCGGTAGATGTATCATGAGGAGACTGCATATGTGGATATAGGAAAAAGAAAATACAGAAATCACAGCTTTGATGCTTTTGAGTGAATGCTTATGTCCTTTGTTATATTAAAGTAGCCCCCTTAGAAAATGACTTGTTTGTATACTTTTTTAGTTTTACATTAAATGTAAAATGTCTGCTTCTGTAGCTGGAAAGATTTGTGCTCATCTTATGCTCATAAATACTTGTAATAGGATGATTGGGGGATTAGAATTCATCTGAAACAGTTTCTGTACATATCTATGCAAGTTTTGGTGGAATTAGATCAAGAATTTCTG 2354 0.3959 MMRLQTYAGLSLIATLAVTYYAFNSRDQFYPAMVYLSTSKICLVLLLNMCLVIMCVLWQLTKKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEHIETTPTVSTLSHVRIVSFMGFILLLDGLFLYSSMKHLIQTWQASVSIFFAFEYMILATTTVSVFVKYLFYVSDMLMEGQWESKPVFTFYLELIRDLLHLSMYLCFFLVIFINYGVPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMITAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTAAGGQHVQQSHVNQQGTGTGSTREAPAAGVVAGDNLSQHQARLQAAAAAASIYEKSYVYPSASSLVWSPGYAVYPPIQRHMAESTDTELNGEQDIEQAQKQFGGPTNMSFPPIGKCLFLPSRTCGANLNYGEGFGNDPNMPNSLLEDQRKLIQYQIEILQNQLQLLEKIKVKGSSDEGTSLSDSRGKNIASSSSASNIGSHDEIQDNNA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01465 550 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Bach13g01465 550 SMART ring_2 292 329 IPR001841 -
Bach13g01465 550 CDD RING-H2_synoviolin 289 330 - -
Bach13g01465 550 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 337 IPR013083 -
Bach13g01465 550 PANTHER RING ZINC FINGER PROTEIN 1 505 - -
Bach13g01465 550 MobiDBLite consensus disorder prediction 516 550 - -
Bach13g01465 550 FunFam ERAD-associated E3 ubiquitin-protein ligase HRD1A 264 339 - -
Bach13g01465 550 SUPERFAMILY RING/U-box 272 336 - -
Bach13g01465 550 MobiDBLite consensus disorder prediction 513 550 - -
Bach13g01465 550 Pfam Ring finger domain 291 330 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01465 Bach-Chr13 18432058 18437686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01465 1 534 C3H Transcription Factor Family AT3G16090 63.619 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01465 K10601 - gmx:100816441 821.617