Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01441 ATGCCATCAACCACCACCACCGCCACTTTCTCTGGGAGCAACTCACCCGACCACCTTGACACCCCGACACTAGACAGGGAGTCCCCCAGGCTCCTGCAATCGATTTCCGAGCACGGCGGATATGCTTACGTCGGCATGGCAGCTCTTGCCGCGGCCGGGGACTTTGGCGCAGCTGAGGCAGCTCGTGAGATGGCGTGGGAACAGCTACACTCGGGGCCCTGGCACTCCGTCCTGCCAGTATGGCGCGACGCTTACTCGTTGGCATGCCTCCACGTTGCGAAATATCTTTACAGCAATGGTGAATTCAAGGAAGCCCTCAGGGCTTTGGATATGGGACTGATCATGGGAGGGATGCTTCTGAGGAAGGACTTGGACTCTGCAGTCAACAAAATATTGGGGAAGACCAAGGACGTTAGGGTTTCTGAAGAAAGCTATGAAGGTTTCGGAAAGTCCGAGCATCGACTTGTTGATCGGGAACCTGATGAGGCTAAGGTTCTCCAGATTTTACCTGTCAAGTCCCTTTCTTGTAAGATTGTGGCAAAGAGGTCCAATCCGTCACTGGAAACGTTTCTGAAAGATTACTACCTGTCTGGTTCCCCAGTTATTATCAGTGATTGTATGGCTCACTGGCCGGCCAAGACAAAATGGAATAGCCGAGATTACTTGATGAGGGTTGCTGGTGACCGTACAGTTCCAGTTGAGGTTGGGAAGAACTATTTATGTGCTGAATGGAAGCAAGAGTTGATTACATTTTCGGAGTTTCTTCAGCGGATAGAGTCCTATGGCTGTTCTTCTGGTGTTCCAACATATCTCGCTCAGCATCCATTATTTGATCAGATAAATGAGCTGCGCAAAGACATTTGTATTCCTGATTATTGCTTTGCTGGTGGAGGGGAGCTAAGATCTCTCAATGCCTGGTTCGGTCCTGTTGGGACAGTAACACCTTTACACCATGATCCACACCATAACATACTTGCTCAGGTTGTTGGGAAGAAGTATATAAGGCTTTATTCTGCATCTCTATCTGAGGAACTTTACCCACACGCTGAAACCATGCTTAGCAATTCCAGTCAGGTTGATCTAGATGACATTGATGAGAGGAAGTTTCCTAAAGTGAAAGAATTGGAATTTGTAGACTGTATCTTAGAGGAAGGTGAAATGCTATATATCCCACCTAAATGGTGGCACTATGTCCGTTCTCTAACTACCAGTATATCTGTTAGCTTTTGGTGGAGCGAAGGAGAAAGTTCATCTGCATTCTAATATTGTGTTACCTTCTTGCCTAAGTCTCAATTCATTTTCTATCGAGAACTGAGCATGCGCGCTTGCTTGATTGCATTACAGGGATATCTATGCCGACGGGTATTTTGTATCACGGGGAAGTATATACCCATGTAC 1398 0.4728 MPSTTTTATFSGSNSPDHLDTPTLDRESPRLLQSISEHGGYAYVGMAALAAAGDFGAAEAAREMAWEQLHSGPWHSVLPVWRDAYSLACLHVAKYLYSNGEFKEALRALDMGLIMGGMLLRKDLDSAVNKILGKTKDVRVSEESYEGFGKSEHRLVDREPDEAKVLQILPVKSLSCKIVAKRSNPSLETFLKDYYLSGSPVIISDCMAHWPAKTKWNSRDYLMRVAGDRTVPVEVGKNYLCAEWKQELITFSEFLQRIESYGCSSGVPTYLAQHPLFDQINELRKDICIPDYCFAGGGELRSLNAWFGPVGTVTPLHHDPHHNILAQVVGKKYIRLYSASLSEELYPHAETMLSNSSQVDLDDIDERKFPKVKELEFVDCILEEGEMLYIPPKWWHYVRSLTTSISVSFWWSEGESSSAF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01441 420 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 83 416 - -
Bach13g01441 420 FunFam lysine-specific demethylase JMJ30 178 411 - -
Bach13g01441 420 Gene3D Cupin 178 412 - -
Bach13g01441 420 ProSiteProfiles JmjC domain profile. 263 420 IPR003347 -
Bach13g01441 420 SUPERFAMILY Clavaminate synthase-like 182 412 - -
Bach13g01441 420 MobiDBLite consensus disorder prediction 1 25 - -
Bach13g01441 420 SMART cupin_9 269 417 IPR003347 -
Bach13g01441 420 MobiDBLite consensus disorder prediction 1 19 - -
Bach13g01441 420 Pfam Cupin-like domain 189 413 IPR041667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01441 Bach-Chr13 18258069 18261629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01441 173 411 Acyl Lipid Metabolism Gene Families AT3G45880 26.460 7.56e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bach13g01441 Cupin_8 1.3e-49 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01441 K24444 - qsa:O6P43_000107 658.292