Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01428 ATGACTAATCCCTACTGCCCCAGTGAGTTCAATGGTTGCTTTGACCTCAATTCTCCTTGCCTTTTCTCAGCTTGTTCGTCATCTTCCTCCAATCCACCATTATATATTCCTTCTACTTATCATAACTTGGGAAATGGCATCTCTTTTACTCGGTACCAACCCTCACCCCCATCTCCTCCTCTAAAAGAAGCGCTTCCTCTCCTTAACCATAGTCCCGCAAGACATGAAGATCTTGAATCTTCTTTTACTACCATGGAAGTGGACAACAAGGAGAAAGAAGGAAGCATCTCTTCTAGTTGTATGGATGATGAAACTGTGACAGTGGCTTTACATTTAGGGCTTCCCATCTCAAGTTCATCTGATTTAGCTCCTTCAAACATAGACTCCACAGAGGTTGCAGACAAAGAAGATGTCCTTGTTGCTTCCGAGTATCCGCCAAACATAATTAACAGAGGTCAATATTGGATCCCTACACCAGCTCAGATTCTGATAGGCCCAACACAGTTTTCATGCCCTCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGACATGGATCTCAATATAGAAAGGGACCAGAGTCTCTAAGGGGAACACAACCCACAGCTATGCTTAGGCTACCCTGCTATTGCTGTGCACCAGGATGCAAGAATAACATTGACCATCCAAGAGCAAAACCACTCAAAGACTTCAGAACCCTTCAAACTCATTACAAGAGAAAGCACGGAATTAAGCCCTTCATGTGTAGAAAATGCTGCAAAGCCTTTGCTGTGAGAGGTGATTGGAGAACCCACGAGAAGAGCTGTGGGAAGCTCTGGTATTGCTCTTGTGGTTCTGATTTCAAGCATAATAGATCTCTTAAAGATCATATTAAGGCATTTGGACATGGCCATACTGCTTATGGTATTGACTGTCTTGAAGAAGATGAAGTAGCATCTGAAATTGAGCAGGAAAATGAGGCCTTCCACTTTGATTAG 996 0.4307 MTNPYCPSEFNGCFDLNSPCLFSACSSSSSNPPLYIPSTYHNLGNGISFTRYQPSPPSPPLKEALPLLNHSPARHEDLESSFTTMEVDNKEKEGSISSSCMDDETVTVALHLGLPISSSSDLAPSNIDSTEVADKEDVLVASEYPPNIINRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKSCGKLWYCSCGSDFKHNRSLKDHIKAFGHGHTAYGIDCLEEDEVASEIEQENEAFHFD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01428 331 FunFam Zinc finger protein WIP2 222 304 - -
Bach13g01428 331 SUPERFAMILY beta-beta-alpha zinc fingers 235 273 IPR036236 -
Bach13g01428 331 ProSitePatterns Zinc finger C2H2 type domain signature. 171 191 IPR013087 -
Bach13g01428 331 ProSiteProfiles Zinc finger C2H2 type domain profile. 169 196 IPR013087 -
Bach13g01428 331 Gene3D Classic Zinc Finger 212 302 - -
Bach13g01428 331 PANTHER ZINC FINGER PROTEIN WIP2 36 326 IPR043584 GO:0003700|GO:0010468
Bach13g01428 331 Gene3D Classic Zinc Finger 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01428 Bach-Chr13 18168023 18170085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01428 1 323 C2H2 Transcription Factor Family AT1G51220 59.012 7.18e-129 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach13g01428 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01428 - - qsa:O6P43_000130 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01428 13 18168023 18170085 Bach13g01428 13 18168023 18170085 ECH
Bach8g01125 8 7515567 7518241 Bach13g01428 13 18168023 18170085 ECH
Bach1g02190 1 34087072 34089382 Bach13g01428 13 18168023 18170085 ECH