Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01425 CTCACTCTCATAACTTGCCTCCCAAATTCCTAGAAAGAGTCCAGCACTGGAATTAAGGAACGTGCGAGATTTCCCTGCCTGAACAATGCAGTTCATGTAATTATTAGCGTTTAGAAGCTTCTTGCTTTTAATGAGATTGATTCTCCGTAAATTCTATTCCATGGTGGTTTTACATTTTAGGAGTAGCTGCGTGCTAGGAGACGGATGGTCTTGTGTTGATTGCATTAATATTTGTTGATTAATCTGCATTGGTGAATCTGAGGGAAGATCAGAAAATTCAAGATGAGTTGGAACTCACACATGGAGGTCCGTTATAATAACATTAGCTATCCCTATAACACAGCAGGGAGCTTTATTGAATATTTTGAAGGTCTCACCTATGAACATGTCAATTTCATTTTTTCTGGTGCTTCACATGCTCAGGATAGTTTGTACCCGTCAACTACGACAAGTATGTACAAGTTTGGACTATCTGAACCTGATAATACTTCGTACTTTCACTACAATTGTCCTTATGAGTTGAATCATCAAGAACCACGTGTGGATGAACACAGAAGGCCTTCAGAGAACTCGTCAACAATCAATGAACAGATGTCATCAGTAAGTACAGAATGGGGAGAAAGTGTAAACCTTACAGCACAAGACAATTCTATTGAATGTCCACGAAGACATCACAATTCCCATGATTATCAGGTCATTTGGCAAGACAATATTGATCCTGACAACATGACTTATGAGGAATTACTCGAGTTAGGTGAAGCTGTTGGAACTCAAAGTCGTGGTCTCTCCCAAGAACAAATCTCTTCGCTTCCAACCTCAAAGTATAAAGGAGGGTTCTTCTTAAGGAAAAACTTACGTGGTGAGAGATGCGTGATTTGCCAGATGGAGTATAAAAGAGGGGACAAGCAGATAAAGTTACCATGCAAGCATGCCTATCATGCTAGTTGTGGGACCAAATGGCTTAGCATCAATAAGGCTTGCCCTATATGTTACATGGAGGTCTTTGCTGACACGTCAAAACACACATAA 1029 0.4014 MSWNSHMEVRYNNISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQDSLYPSTTTSMYKFGLSEPDNTSYFHYNCPYELNHQEPRVDEHRRPSENSSTINEQMSSVSTEWGESVNLTAQDNSIECPRRHHNSHDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLSQEQISSLPTSKYKGGFFLRKNLRGERCVICQMEYKRGDKQIKLPCKHAYHASCGTKWLSINKACPICYMEVFADTSKHT 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01425 248 ProSiteProfiles Zinc finger RING-type profile. 196 236 IPR001841 -
Bach13g01425 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 241 IPR033276 GO:0004842|GO:0016567|GO:0046621
Bach13g01425 248 FunFam E3 ubiquitin ligase BIG BROTHER 158 241 - -
Bach13g01425 248 Pfam Ring finger domain 195 236 IPR001841 -
Bach13g01425 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 241 IPR013083 -
Bach13g01425 248 SMART ring_2 196 236 IPR001841 -
Bach13g01425 248 SUPERFAMILY RING/U-box 195 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01425 Bach-Chr13 18130572 18133658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01425 8 247 C3H Transcription Factor Family AT3G63530 43.265 1.62e-67 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01425 K19045 - gmx:100793907 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01425 13 18130572 18133658 Bach9g00050 9 383224 391210 BWGD
Bach13g01425 13 18130572 18133658 Bach13g01425 13 18130572 18133658 ECH