Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01417 ATGAGAAAGCCAGAGCCCTCCATGAAAAACAACAGCAAGCTTAGGAAGGGGTTATGGTCACCAGAAGAAGATGACAAGCTCATGAACTATATGCTAAACAATGGACAAGGTTGTTGGAGTGACGTGGCCAGAAATGCTGATTTGCAAAGGTGTGGCAAAAGTTGTCGCCTTCGATGGATCAATTACTTGAGGCCTGATCTCAAACGAGGCGCATTCTCACCACAAGAAGAAGAACTCATCATCCATTTGCATTCCCTTCTTGGCAACAGATGGTCTCAAATAGCGGCACGCTTGCCCGGTCGAACTGACAATGAAATCAAGAATTTCTGGAATTCGACAATTAAGAAAAGGCTCAAGAACTTGTCATCAACAAACACAACCTCACCAAACGCAAGTGAGTCCTCAATTTCTGAGCCTAAAGACCTCAACATGAGAGGGTTTATTTCTGCACATGTCCAAAATGGCTATATGCGTTCATCTTCATCACCATCAATGCAAGCCACAGTTATCAATAACGTAATTGACAGATTGCCTGTGCTGGAGCATGGACTAAACTTGCCAGCTGCTGCAGGTGGGTTCTCCAATGTTACATGGCCGTGCTTCACACAAAGTGGAGTTGATAACAATGGTTTTTATTTAGAAAATGGGGTGTTTGAAAGTGTAAATATTGGACAGGAAGGTGACCTGTTTGTTCCTCCTCTAGAGAGTGTTAACAGTGCTGCTACTGATAACCTGAAAGTGGAGATTACGTGCAATAGGGACATCACTAACAATAGTTACTTTGATGACATAAACAGTATCATTAATAACAATCACAGATCTGAAAATAAAGGTGGAGTGGAGAATTTATTTCAAGAGGAGTTAACAATGGGAGAATGGGACTTGGAGGAGTTGATGAAAGATGTTTCATCCTTTCCCTTTCTTGATTTTTCAAGCTGA 939 0.4185 MRKPEPSMKNNSKLRKGLWSPEEDDKLMNYMLNNGQGCWSDVARNADLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTNTTSPNASESSISEPKDLNMRGFISAHVQNGYMRSSSSPSMQATVINNVIDRLPVLEHGLNLPAAAGGFSNVTWPCFTQSGVDNNGFYLENGVFESVNIGQEGDLFVPPLESVNSAATDNLKVEITCNRDITNNSYFDDINSIINNNHRSENKGGVENLFQEELTMGEWDLEELMKDVSSFPFLDFSS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01417 312 Gene3D - 13 69 - -
Bach13g01417 312 FunFam Transcription factor MYB46 70 142 - -
Bach13g01417 312 FunFam MYB transcription factor 13 69 - -
Bach13g01417 312 CDD SANT 71 111 IPR001005 -
Bach13g01417 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Bach13g01417 312 SMART sant 68 116 IPR001005 -
Bach13g01417 312 SMART sant 15 65 IPR001005 -
Bach13g01417 312 PANTHER MYB DOMAIN PROTEIN 55 8 158 - -
Bach13g01417 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bach13g01417 312 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bach13g01417 312 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Bach13g01417 312 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bach13g01417 312 CDD SANT 19 63 IPR001005 -
Bach13g01417 312 Gene3D - 70 142 - -
Bach13g01417 312 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bach13g01417 312 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01417 Bach-Chr13 18073901 18075366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01417 10 310 MYB Transcription Factor Family AT3G08500 46.462 1.14e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach13g01417 Myb_DNA-binding 4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01417 K09422 - gmx:100786151 459.914