Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01400 ATGGAGGGTGATGATCAGGCAGCAGCATCAGAAAAGGGGGAGCAAGCAGGCATGGATATTGAGCAAAGTCAAGGTGCAATTAGCCAAGGCAGGTCCTATGAGTGTACCTTCTGCAAGAGGGGCTTCTCTAATGCACAAGCACTGGGTGGCCACATGAACATCCACAGGAAAGACAAAGCCAAGCTCAAGCAATCTCCAAGCGAAGCCAAGCCTGCAACTGCAACTGAAGACAGAAGCAACTTAAACTGGCCATGGAACGACTCCTCCAAGGATCAAAGCAACCTTGTTGATATCAGACAACTTCCTCTTTTTGCTGAAACACCTTATAGTTACAGCAGTGAACCTCAAAAGCCAAGTGATCAACGACTAATTCATGGTGCAGAAAAAGGTTTCTCATCTCCCCATGGTTCCTCTCCGGATTTAGACCTAGAACTCAGACTTGGGCCTGAGCCACAAGACTCGTCACCAGCAAGTTCTGTGGGTACCAGAAAATTCTTTTAA 501 0.4731 MEGDDQAAASEKGEQAGMDIEQSQGAISQGRSYECTFCKRGFSNAQALGGHMNIHRKDKAKLKQSPSEAKPATATEDRSNLNWPWNDSSKDQSNLVDIRQLPLFAETPYSYSSEPQKPSDQRLIHGAEKGFSSPHGSSPDLDLELRLGPEPQDSSPASSVGTRKFF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01400 166 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Bach13g01400 166 MobiDBLite consensus disorder prediction 152 166 - -
Bach13g01400 166 MobiDBLite consensus disorder prediction 1 26 - -
Bach13g01400 166 Pfam C2H2-type zinc finger 33 57 - -
Bach13g01400 166 PANTHER OS07G0101800 PROTEIN 10 151 - -
Bach13g01400 166 SMART c2h2final6 33 55 IPR013087 -
Bach13g01400 166 MobiDBLite consensus disorder prediction 109 166 - -
Bach13g01400 166 SUPERFAMILY beta-beta-alpha zinc fingers 30 60 IPR036236 -
Bach13g01400 166 Gene3D Classic Zinc Finger 10 91 - -
Bach13g01400 166 MobiDBLite consensus disorder prediction 68 94 - -
Bach13g01400 166 MobiDBLite consensus disorder prediction 48 94 - -
Bach13g01400 166 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01400 Bach-Chr13 17985731 17986231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01400 28 160 C2H2 Transcription Factor Family AT3G53820 35.664 1.57e-19 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach13g01400 zf-C2H2_6 9.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01400 - - aprc:113855974 144.436