Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01380 ATGGCTGTGCCCACTGTGCTCTGCATTGCCTCTCTCATCTCACTAATGTTGTACATTGTTGAAGCTAGAATTCCTGGGGTCTACAGTGGGGGTCCTTGGCAAAGTGCTCATGCTACCTTCTATGGAGGCTCTGATGCTTCTGGCACCATGGGTGGAGCTTGTGGGTATGGAAATCTGTACAGCCAAGGGTACGGTGTGAACACGGCGGCGTTGAGCACGGCACTTTTCAACAGTGGCCTGAGCTGTGGTGCCTGTTTTGAGATCAAGTGTGCAAATGACAGACAATGGTGCCACTCAGGCAGTCCATCCATCTTTATTACAGCCACAAACTTCTGCCCACCCAATTATGCTCTTCCAAACGACAATGGCGGATGGTGCAACCCTCCTCGTCCACACTTTGACCTTGCCATGCCTATGTTCCTTAAGATTGCAGAGTACCGCGCCGGAATTGTCCCTGTTGCCTTTCGCCGGGTGCCGTGCAGAAAGCCAGGTGGGATTAGGTTCACGATCAATGGCCACCGTTACTTTAACCTGGTATTGATCAGCAACGTGGCGGGTGCAGGGGATATCGTGCGCGTTTATGTGAAGGGGTCGAGGACCGGTTGGATGCCCTTGAGCCGTAACTGGGGTCAAAACTGGCAGTCAAACGCCGTTCTGGTGGGCCAGTCATTGTCGTTCAGGGTCACAGGCGGTGACAGGCGCACTTCCACATCATGGAACATCGTTCCGAGCGATTGGCAATTCGGTCAAACTTTTACTGGAAAGAATTTTCGAGTCTGATGATCACTCCACCATAAACAAAAACAAAACCATTCTTTAGGTTGCCTCGCCGTTTATCTATTTCCACTTTCACTCTTTTGTCTCCAATTTTCATGGGCTTCTTTTTTAAAGAAAAATTATTATTTTTAACTGGGTGTGTGGATGGAGACTTC 932 0.4968 MAVPTVLCIASLISLMLYIVEARIPGVYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDRQWCHSGSPSIFITATNFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKPGGIRFTINGHRYFNLVLISNVAGAGDIVRVYVKGSRTGWMPLSRNWGQNWQSNAVLVGQSLSFRVTGGDRRTSTSWNIVPSDWQFGQTFTGKNFRV 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01380 259 PRINTS Expansin/Lol pI family signature 32 47 IPR007118 GO:0005576
Bach13g01380 259 PRINTS Expansin/Lol pI family signature 202 216 IPR007118 GO:0005576
Bach13g01380 259 PRINTS Expansin/Lol pI family signature 240 254 IPR007118 GO:0005576
Bach13g01380 259 PRINTS Expansin/Lol pI family signature 72 90 IPR007118 GO:0005576
Bach13g01380 259 PRINTS Expansin/Lol pI family signature 148 164 IPR007118 GO:0005576
Bach13g01380 259 PRINTS Expansin/Lol pI family signature 50 68 IPR007118 GO:0005576
Bach13g01380 259 SUPERFAMILY Barwin-like endoglucanases 32 183 IPR036908 -
Bach13g01380 259 PRINTS Expansin signature 90 101 IPR002963 GO:0009664
Bach13g01380 259 PRINTS Expansin signature 104 114 IPR002963 GO:0009664
Bach13g01380 259 PRINTS Expansin signature 140 153 IPR002963 GO:0009664
Bach13g01380 259 PRINTS Expansin signature 164 176 IPR002963 GO:0009664
Bach13g01380 259 PRINTS Expansin signature 211 232 IPR002963 GO:0009664
Bach13g01380 259 PRINTS Expansin signature 123 140 IPR002963 GO:0009664
Bach13g01380 259 PRINTS Expansin signature 176 197 IPR002963 GO:0009664
Bach13g01380 259 PRINTS Expansin signature 240 256 IPR002963 GO:0009664
Bach13g01380 259 PRINTS Expansin signature 63 77 IPR002963 GO:0009664
Bach13g01380 259 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 175 254 IPR007117 -
Bach13g01380 259 SMART dpbb_1 68 155 IPR007112 -
Bach13g01380 259 Gene3D - 165 257 IPR036749 -
Bach13g01380 259 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 165 IPR007112 -
Bach13g01380 259 FunFam Expansin 22 161 - -
Bach13g01380 259 SUPERFAMILY PHL pollen allergen 162 254 IPR036749 -
Bach13g01380 259 Gene3D - 20 161 IPR036908 -
Bach13g01380 259 Pfam Lytic transglycolase 68 154 IPR009009 -
Bach13g01380 259 FunFam Expansin 165 257 - -
Bach13g01380 259 Pfam Expansin C-terminal domain 166 243 IPR007117 -
Bach13g01380 259 CDD DPBB_EXPA_N 32 160 - -
Bach13g01380 259 PANTHER EXPANSIN-A15 22 257 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01380 Bach-Chr13 17859039 17861359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01380 1 259 Expansin Gene Family AT2G39700 82.239 2.00e-163 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01380 - - qsa:O6P43_000200 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01380 13 17859039 17861359 Bach9g00094 9 661150 663129 BWGD