Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01378 ATGGGCGTTTGTTTAAGCACCCAAATTAAAGCCGAGAGCAGCCCATGTAACACAGGGTTTAAATCAAATTACATGAGCACAGATGGAAACGACCTTAGCACTACTGGTAGTAAGGCCTCGGCTGTATCAGTGCCTCAGACTCCTCGGAGTGAGGGTGAGATCCTGCAGTCATCCAATTTAAAGAGCTTTAGTTTGGCGGAACTGAAGATGGCCACCAGAAATTTCCGTCCAGATAGCGTGTTAGGTGAAGGTGGTTTCGGATCAGTTTATAAGGGATGGATTGATGAGCATTCATTGGCAGCTGCCAAACCTGGGACTGGCATTGTAGTTGCTGTAAAAAGACTTAATCAAGATGGTATCCAAGGTCACAAGGAGTGGTTGGCTGAAGTAAACTATCTTGGATTGCTTTCTCATCCTCATCTTGTGAAACTGATTGGGTACTGCCTCGAAGATGAACACCGCCTATTGGCCTATGAATTTATGCCTCGGGGAAGCTTGGAGAACCATTTGTTCAGGAGAGGCTCTTATTTCCAACCTCTTTCTTGGAGCCTCCGGATGAAGGTTGCCCTTGGCGCTGCAAAAGGACTTGCATATCTTCACAGTGCTGAAACAAAAGTGATATATCGTGATTTTAAGACTTCAAATGTCTTACTGGATTCAAATTATAATGCAAAACTTTCTGATTTTGGGCTGGCCAAGGATGGACCAACAGGTGACAGAAGTCATGTCTCTACCCGGGTAATGGGGACTTATGGATATGCAGCTCCTGAATATCTAGCCACTGGTCACTTAACTGCCAAAAGTGATGTGTATAGTTTTGGAGTTGTCATGCTTGAAATGTTATCAGGGCGGCGAGCAGTTGACAAGAATCAACCATCTGGACAGCACAATTTGGTGGAATGGGCTAAACCATACCTGGCTAACAAGCGTAAGATTTTCCGCGTACTGGACAACCGTCTTGAAGGTCAGTACTCAGCGGATGAAGCCCACAAAGCAGCTACTCTTGCTACACGATGCCTATCAACTGAATCCAAGTTCAGGCCAAACATGGATGAGGTTGTTACAGCTTTGGAGCAGCTGCAGATTTCCATTGTAAATGGTGAAGGCAATCAAAGCCCTTTTAGTAATAGGGCTGGTGCTCGCTCCGGAGTCCGTAGAAGGAGTGCCGATGATAGTTGCAGTTGGAGAACTACTCCACATTTTCCTCGCCCTTCTGCTCCCCCCATCTGTGCTTGA 1236 0.4612 MGVCLSTQIKAESSPCNTGFKSNYMSTDGNDLSTTGSKASAVSVPQTPRSEGEILQSSNLKSFSLAELKMATRNFRPDSVLGEGGFGSVYKGWIDEHSLAAAKPGTGIVVAVKRLNQDGIQGHKEWLAEVNYLGLLSHPHLVKLIGYCLEDEHRLLAYEFMPRGSLENHLFRRGSYFQPLSWSLRMKVALGAAKGLAYLHSAETKVIYRDFKTSNVLLDSNYNAKLSDFGLAKDGPTGDRSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVMLEMLSGRRAVDKNQPSGQHNLVEWAKPYLANKRKIFRVLDNRLEGQYSADEAHKAATLATRCLSTESKFRPNMDEVVTALEQLQISIVNGEGNQSPFSNRAGARSGVRRRSADDSCSWRTTPHFPRPSAPPICA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01378 411 ProSitePatterns Protein kinases ATP-binding region signature. 81 113 IPR017441 GO:0005524
Bach13g01378 411 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Bach13g01378 411 Gene3D Transferase(Phosphotransferase) domain 1 161 372 - -
Bach13g01378 411 MobiDBLite consensus disorder prediction 368 411 - -
Bach13g01378 411 CDD STKc_IRAK 81 360 - -
Bach13g01378 411 FunFam Serine/threonine-protein kinase BIK1 42 160 - -
Bach13g01378 411 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g01378 411 PANTHER OS01G0588500 PROTEIN-RELATED 42 361 - -
Bach13g01378 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Bach13g01378 411 SUPERFAMILY Protein kinase-like (PK-like) 48 357 IPR011009 -
Bach13g01378 411 Pfam Protein tyrosine and serine/threonine kinase 79 357 IPR001245 GO:0004672|GO:0006468
Bach13g01378 411 FunFam Probable serine/threonine-protein kinase PBL8 161 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01378 Bach-Chr13 17846816 17848864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g01378 51 357 Glycoside Hydrolase AT3G07070 51.299 7.50e-109 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bach13g01378 PK_Tyr_Ser-Thr 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01378 - - pop:7485703 665.996